Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL6P29-201ENST00000414863 865 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL157831.1-201ENST00000426134 473 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC023141.6-201ENST00000429418 337 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 RPS3AP54-201ENST00000435535 734 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 BTG3P1-201ENST00000435859 716 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 ACTR3P2-201ENST00000439585 1257 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 CEACAMP9-201ENST00000442990 513 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 CYCSP42-201ENST00000450823 238 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 FABP3P2-201ENST00000453169 399 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC116533.1-201ENST00000459748 321 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC006517.1-201ENST00000480485 328 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC016687.1-201ENST00000482574 353 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC093840.1-201ENST00000511599 336 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 RNA5SP73-201ENST00000516744 108 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC068831.4-201ENST00000556118 109 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC068790.4-201ENST00000602474 263 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 MIR7702-201ENST00000621931 59 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC000123.2-201ENST00000623124 461 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AP003497.2-201ENST00000624220 967 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC009951.1-201ENST00000623674 2614 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AP001486.2-201ENST00000561652 5113 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC233968.1-201ENST00000611212 1300 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL158163.1-201ENST00000603915 1649 ntBASIC3.15□□□□□ -1.9
HLA-DRB4X5D2U9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 RNU1-14P-201ENST00000362759 152 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 SNORA3C-201ENST00000408792 125 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 RNU6-603P-201ENST00000411403 107 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 MFSD13B-201ENST00000420133 1290 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 FTH1P6-201ENST00000430768 320 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL138787.1-202ENST00000437804 898 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 RPL23AP46-201ENST00000438548 490 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 CBX1P1-201ENST00000440184 427 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL354710.1-201ENST00000453641 246 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 EIF2S2P4-201ENST00000461070 984 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC011276.1-201ENST00000469688 323 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 RN7SL303P-201ENST00000469773 251 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC037198.2-201ENST00000478845 733 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 RPS29P19-201ENST00000479709 171 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 BNIP3P41-201ENST00000503774 571 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 NARSP2-201ENST00000518524 679 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC009643.1-201ENST00000532030 391 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC084757.1-201ENST00000559987 490 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC010680.3-201ENST00000604215 520 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC116447.1-201ENST00000613153 453 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL445363.3-201ENST00000623080 671 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC244205.2-202ENST00000635781 342 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AC008013.2-202ENST00000637965 364 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 AL139254.3-201ENST00000641097 674 ntBASIC3.15□□□□□ -1.91
HLA-DRB4X5D2U9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms