Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 TDGF1P1-201ENST00000445734 527 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC073587.1-201ENST00000447093 876 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 PTMAP3-201ENST00000447474 330 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL162591.2-201ENST00000449634 317 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 TPT1P13-201ENST00000449760 499 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 SYT14P1-201ENST00000481459 721 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC026407.1-201ENST00000518369 204 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AP000916.1-201ENST00000533869 835 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AP001160.4-201ENST00000596971 382 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC068790.4-201ENST00000602474 263 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL606834.3-201ENST00000602615 496 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC112220.2-201ENST00000605513 533 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC100847.1-201ENST00000611316 481 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL512427.1-201ENST00000618593 349 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RPL23AP61-201ENST00000623642 466 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC145207.9-201ENST00000623802 325 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC090017.1-201ENST00000548612 1779 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AP000756.2-201ENST00000624168 2567 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 SALL4P2-201ENST00000423288 2910 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC009313.2-201ENST00000417893 1941 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 RNU6-207P-201ENST00000384137 107 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AL355615.1-201ENST00000406187 641 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 Y_RNA.625-201ENST00000411256 107 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC096533.1-201ENST00000411645 353 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 RPS3AP25-201ENST00000411660 793 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 RPL26P37-201ENST00000411983 438 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 TATDN1P1-201ENST00000414123 891 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 RPEP3-201ENST00000425462 676 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 RPL23AP1-201ENST00000428990 471 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AL031584.1-201ENST00000447169 754 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 ISCUP1-201ENST00000454451 448 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 DUXAP8-207ENST00000456786 622 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 SUMO2P5-201ENST00000506790 245 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC134698.5-201ENST00000519444 336 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 OR7E13P-201ENST00000526052 910 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC106734.1-201ENST00000568646 663 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC209154.1-201ENST00000582156 337 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC130352.1-201ENST00000602979 661 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 DUXAP10-204ENST00000612052 616 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AL133243.1-201ENST00000614487 366 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 CYCSP41-201ENST00000616920 296 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 LINC00901.1-201ENST00000617252 152 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 PHKBP1-201ENST00000450951 1951 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 AC090971.4-201ENST00000560291 1800 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 MFSD8-213ENST00000641134 1327 ntBASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX9Q9Y5X1 DHX9P1-201ENST00000436565 3076 ntBASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 AL355852.1-201ENST00000454081 1771 ntBASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 MTND5P11-201ENST00000511037 1812 ntBASIC4.91□□□□□ -1.62
SNX9Q9Y5X1 DDX18P3-201ENST00000404856 2007 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms