Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 OR10D1P-201ENST00000355343 936 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 SNORA33.2-201ENST00000365413 134 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RNU6-474P-201ENST00000384243 107 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 Y_RNA.459-201ENST00000384251 102 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC016769.3-201ENST00000396562 315 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RPL7P60-201ENST00000397636 735 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RNU2-62P-201ENST00000410868 191 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SKP268-201ENST00000411107 316 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL121776.1-201ENST00000429337 372 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 ERLEC1P1-201ENST00000433806 578 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 TRBV26-201ENST00000456572 344 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC128716.1-201ENST00000475129 166 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RNA5SP337-201ENST00000517007 109 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 RNA5SP278-201ENST00000517055 102 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL135978.1-201ENST00000553618 1266 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC026464.5-201ENST00000562497 722 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 MIR4301-201ENST00000577203 66 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC006120.1-201ENST00000579375 546 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC136443.5-201ENST00000603741 370 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 SNRPGP17-201ENST00000603780 214 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AP001521.2-201ENST00000608772 546 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL355472.4-201ENST00000610233 626 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC005899.7-201ENST00000618199 588 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 MIR6829-201ENST00000620375 67 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC020658.2-201ENST00000559030 4020 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 AC093278.2-201ENST00000564956 2485 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 DLEU2L-201ENST00000371086 3555 ntBASIC6.59□□□□□ -1.35
PCDHGA11Q9Y5H2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.59□□□□□ -1.36
PCDHGA11Q9Y5H2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.59□□□□□ -1.36
PCDHGA11Q9Y5H2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHGA11Q9Y5H2 AL139384.2-201ENST00000613809 3590 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC022034.1-201ENST00000512867 2156 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AL512329.1-201ENST00000404600 1592 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL24P4-201ENST00000326586 421 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AL451142.1-201ENST00000375867 775 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-1297P-201ENST00000384415 104 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU1-56P-201ENST00000391303 164 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 PDCL3P5-201ENST00000398028 722 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU4-26P-201ENST00000410270 107 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 GSTM3P2-201ENST00000412746 530 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC096632.1-201ENST00000427395 310 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 CEACAMP9-201ENST00000442990 513 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 HMGB1P15-201ENST00000453854 435 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC005229.2-201ENST00000456995 399 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL149P-201ENST00000465197 281 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 GMFBP1-201ENST00000467831 427 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC006512.1-201ENST00000468816 291 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL456P-201ENST00000469290 295 ntBASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDHGA11Q9Y5H2 AC027575.1-201ENST00000481064 460 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms