Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 CCDC58P3-201ENST00000590792 430 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC245036.5-201ENST00000596330 847 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AP002906.1-201ENST00000603405 233 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC107952.2-201ENST00000606048 486 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC097478.2-201ENST00000610572 514 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC009163.6-201ENST00000612367 342 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC116447.1-201ENST00000613153 453 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AL121895.2-201ENST00000619558 447 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AL359757.1-201ENST00000623176 255 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC011815.3-201ENST00000624194 473 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 AC009229.4-201ENST00000623854 1947 ntBASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MRPS28Q9Y2Q9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 DDX18P4-201ENST00000511690 1966 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 TLK1P1-201ENST00000456760 2440 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 RNU6-225P-201ENST00000384613 103 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 MIR105-2-201ENST00000385083 81 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 SNORD65C-201ENST00000390962 71 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 RNU6-244P-201ENST00000391028 104 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 RPS27AP11-201ENST00000402798 447 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 LIPT1P1-201ENST00000415870 1186 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 MTCO3P4-201ENST00000419236 787 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 OR2X1P-201ENST00000421144 687 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 OR2AM1P-201ENST00000422137 422 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 RHOT1P3-201ENST00000436571 331 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 PTGES3P1-201ENST00000439531 483 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 CNOT7P2-201ENST00000441051 832 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 CR769776.1-201ENST00000441254 787 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 ARL4AP3-201ENST00000441452 574 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 HSFY3P-201ENST00000444242 1191 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL591719.1-201ENST00000444669 744 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 OR51B8P-201ENST00000449892 769 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 NAP1L1P3-201ENST00000462291 880 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 UBA52P7-201ENST00000486088 380 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 MTND4LP2-201ENST00000502312 285 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 SNRPCP2-201ENST00000504370 475 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 RNU6-1004P-201ENST00000516584 111 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC092490.3-201ENST00000545370 572 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 GSTP1P1-201ENST00000548078 319 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 OR11J2P-201ENST00000555298 907 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 MIR4691-201ENST00000583764 85 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 OR7E18P-201ENST00000592589 702 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC008751.2-201ENST00000597885 980 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL035411.2-201ENST00000604022 421 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 PART1_2.1-201ENST00000612397 250 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AL512624.1-201ENST00000613638 469 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC140113.4-201ENST00000622087 222 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC005086.4-201ENST00000623065 213 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 BMS1P21-201ENST00000634565 365 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 LINC01808-202ENST00000641680 1116 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AC139713.2-210ENST00000641741 992 ntBASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
MRPS28Q9Y2Q9 AP001273.1-201ENST00000624493 3152 ntBASIC4.09□□□□□ -1.76
MRPS28Q9Y2Q9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms