Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 TCEA1P4-201ENST00000415066 844 ntBASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 OR51A6P-201ENST00000418680 1004 ntBASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 OR8F1P-201ENST00000425243 930 ntBASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AL133244.1-201ENST00000456007 258 ntBASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AC010460.1-201ENST00000507087 466 ntBASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 RNA5SP49-201ENST00000516450 115 ntBASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 HSPE1P16-201ENST00000426640 348 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 NDUFA5P10-201ENST00000432147 357 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 NMNAT1P2-201ENST00000435192 860 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 CACYBPP1-201ENST00000438592 684 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 RPL35AP15-201ENST00000468042 339 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 AC027176.2-201ENST00000559166 746 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 AP002360.3-201ENST00000607673 710 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 AC093775.1-201ENST00000624154 1868 ntBASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
SHROOM4Q9ULL8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 RNA5SP36-201ENST00000410197 133 ntBASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 TRMT10BP1-201ENST00000519377 943 ntBASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 MTND2P7-201ENST00000521337 640 ntBASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.21□□□□□ -1.09
SHROOM4Q9ULL8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
SHROOM4Q9ULL8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SHROOM4Q9ULL8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC8.21□□□□□ -1.1
SHROOM4Q9ULL8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 RAD1P1-201ENST00000231383 813 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 PTMAP5-201ENST00000393073 333 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 NOTCH2P1-201ENST00000443481 624 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 ATP1B1P1-201ENST00000509767 915 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC093014.1-201ENST00000548926 724 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC010201.1-201ENST00000605051 540 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC096577.2-201ENST00000611455 153 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AC012314.7-201ENST00000619693 93 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 HSPA8P17-201ENST00000427029 1382 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 AP001284.1-201ENST00000528393 2118 ntBASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC8.2□□□□□ -1.1
SHROOM4Q9ULL8 OR56B2P-201ENST00000317102 954 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 RN7SKP186-201ENST00000365371 303 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 FCF1P5-201ENST00000406490 482 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 SETP10-201ENST00000424368 814 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 CDY14P-201ENST00000431260 1014 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 CDY12P-201ENST00000440679 1015 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 CDY13P-201ENST00000445813 1015 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 CDY23P-201ENST00000451661 1014 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 ZNF415P1-201ENST00000582279 1166 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 AC091178.1-203ENST00000584586 279 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 COX6CP4-201ENST00000605798 228 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 AC243756.2-201ENST00000618406 463 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 THAP12P5-201ENST00000405864 2275 ntBASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SHROOM4Q9ULL8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms