Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC117490.2-201ENST00000610042 594 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AP000894.4-201ENST00000610185 483 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL161616.1-201ENST00000611867 286 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 FAM27D1-201ENST00000612308 341 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AC002044.3-201ENST00000623314 541 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL049555.1-201ENST00000562834 1933 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL031985.3-201ENST00000565390 2449 ntBASIC3.91□□□□□ -1.78
VAPAQ9P0L0 AL132640.2-201ENST00000559968 1698 ntBASIC3.9□□□□□ -1.78
VAPAQ9P0L0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VAPAQ9P0L0 AC079741.1-201ENST00000321498 212 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 SNORD65-201ENST00000391079 73 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 FAR2P2-201ENST00000413041 594 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC069213.2-201ENST00000420238 366 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AL157884.3-201ENST00000448273 1184 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 RPL36AP13-201ENST00000457490 317 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 HPRT1P2-201ENST00000505250 544 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC109458.1-201ENST00000508858 316 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 KRT19P6-201ENST00000510983 209 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 RNA5SP49-201ENST00000516450 115 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 IGHV3-32-201ENST00000519182 355 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 MTND1P6-201ENST00000523621 946 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 SMARCE1P4-201ENST00000523647 241 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AL360157.1-201ENST00000565962 87 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 RPL23AP87-202ENST00000573039 466 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC090948.1-201ENST00000607464 549 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC211433.2-201ENST00000608433 387 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC128687.2-201ENST00000609657 566 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 MIR7703-201ENST00000620784 77 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC103858.2-201ENST00000621471 543 ntBASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VAPAQ9P0L0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RNVU1-6-201ENST00000364688 164 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 P2RY10P2-201ENST00000416730 913 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AL391219.1-201ENST00000422570 483 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 MTCYBP29-201ENST00000436327 1006 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 MTND2P25-201ENST00000449028 610 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 BUD31P2-201ENST00000449374 300 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RPL31P20-201ENST00000449593 360 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 C1DP3-201ENST00000455013 423 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RPL7P32-201ENST00000457119 744 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 EIF2S2P4-201ENST00000461070 984 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RPL23AP71-201ENST00000470966 469 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RN7SL826P-201ENST00000479724 288 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AF213884.1-201ENST00000488102 463 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RN7SL810P-201ENST00000493031 276 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 RNU7-143P-201ENST00000516781 65 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC010476.1-201ENST00000519111 851 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 OR7E10P-201ENST00000526420 991 ntBASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.89□□□□□ -1.79
VAPAQ9P0L0 AC027281.1-201ENST00000574178 758 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms