Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL512605.1-202ENST00000441919 381 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC132479.1-201ENST00000449160 144 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSU72Q9NP77 SDC4P-201ENST00000453285 601 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 MEMO1P3-201ENST00000459811 302 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 RN7SL372P-201ENST00000461982 298 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 MTND1P3-201ENST00000484956 952 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 RPL35P6-201ENST00000490024 372 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 RNU6-1281P-201ENST00000516223 105 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 Y_RNA.710-201ENST00000516975 110 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 HIGD1AP6-201ENST00000521833 279 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC068587.4-201ENST00000533893 186 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC090424.1-201ENST00000535243 736 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 DUX4L52-201ENST00000549363 777 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 HIF1AP1-201ENST00000553642 175 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AP001180.3-201ENST00000582221 145 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC022916.3-201ENST00000592961 742 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AL031429.2-201ENST00000602605 649 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AL683826.1-201ENST00000624104 627 ntBASIC6.01□□□□□ -1.45
SSU72Q9NP77 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.01□□□□□ -1.45
SSU72Q9NP77 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSU72Q9NP77 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSU72Q9NP77 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSU72Q9NP77 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC093225.1-201ENST00000506867 1408 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6□□□□□ -1.45
SSU72Q9NP77 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 AL049693.1-201ENST00000402760 611 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 RN7SKP108-201ENST00000411367 328 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 BTF3L4P3-201ENST00000418879 476 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 CRIP1P1-201ENST00000427567 185 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AC138761.5-201ENST00000433967 325 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AC023347.2-201ENST00000433994 462 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 TAAR7P-201ENST00000436141 242 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSU72Q9NP77 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6□□□□□ -1.45
SSU72Q9NP77 OR52E7P-201ENST00000452394 933 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 RPL12P39-201ENST00000455456 496 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AC097493.1-201ENST00000463958 372 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 RNU6-150P-201ENST00000516237 95 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 OR5D2P-201ENST00000524390 911 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AP003072.1-201ENST00000531740 145 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6□□□□□ -1.45
SSU72Q9NP77 AP003034.1-201ENST00000534621 422 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 VDAC2P2-201ENST00000544463 901 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 NANOGNBP2-201ENST00000544753 553 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6□□□□□ -1.45
SSU72Q9NP77 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6□□□□□ -1.45
SSU72Q9NP77 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6□□□□□ -1.45
SSU72Q9NP77 YWHAQP7-201ENST00000603536 658 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC011816.2-201ENST00000607089 556 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AL445222.1-201ENST00000607259 628 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AP001521.1-201ENST00000609150 300 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AL132765.2-201ENST00000610812 351 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6□□□□□ -1.45
SSU72Q9NP77 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC015871.5-202ENST00000623252 701 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SSU72Q9NP77 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms