Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OR4F13P-201ENST00000428478 931 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 RPL7L1P1-201ENST00000448259 785 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC091153.1-201ENST00000466297 402 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 MIR2116-201ENST00000517221 80 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 AC022968.1-201ENST00000567372 442 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 HNRNPCP4-201ENST00000571636 900 ntBASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.61□□□□□ -1.83
KIAA1549Q9HCM3 U8.11-201ENST00000384699 133 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 U8.12-201ENST00000384701 133 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AL139247.1-201ENST00000422768 325 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 OR8F1P-201ENST00000425243 930 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 U8.18-201ENST00000459285 133 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RPS3AP6-201ENST00000484430 795 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 PPM1AP1-201ENST00000502740 1135 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RFPL4AP5-201ENST00000514977 504 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AL137849.1-201ENST00000604767 169 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RNU6-84P-201ENST00000607737 102 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AP000255.1-201ENST00000610276 676 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 CASC19-261ENST00000641853 1638 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RN7SKP156-201ENST00000410308 342 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RN7SKP202-201ENST00000410439 330 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 RPL7P2-201ENST00000427639 268 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 FABP3P2-201ENST00000453169 399 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC090589.1-201ENST00000473109 362 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC146944.2-203ENST00000502493 354 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC139495.1-202ENST00000513164 354 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 MIR3158-1-201ENST00000583596 81 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AL451044.1-201ENST00000604867 238 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC245389.1-201ENST00000605141 529 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 FP236240.3-201ENST00000623061 327 ntBASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.6□□□□□ -1.83
KIAA1549Q9HCM3 AC092435.4-201ENST00000623012 4159 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 RNU6-249P-201ENST00000363016 102 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 MIR513A2-201ENST00000385249 127 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 RANP8-201ENST00000444720 713 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AL133547.1-201ENST00000448546 220 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC063950.1-201ENST00000552036 308 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC007599.1-201ENST00000568688 1174 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AP005901.4-201ENST00000577336 569 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 MIR4444-1-201ENST00000581696 74 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 MIR4444-2-201ENST00000584390 74 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC068020.1-201ENST00000594215 661 ntBASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.59□□□□□ -1.83
KIAA1549Q9HCM3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms