Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AL353743.4-201ENST00000422653 1547 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 MIR448-201ENST00000362131 111 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 SNORA11F-201ENST00000408237 128 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AL512504.1-201ENST00000415494 778 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AL161631.1-201ENST00000417933 486 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AL160175.1-201ENST00000428124 247 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 MTCO1P57-201ENST00000432182 261 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 LYPLA1P1-201ENST00000434514 622 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 FTH1P16-201ENST00000435241 552 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 RPL7P22-201ENST00000466005 733 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC010374.1-201ENST00000503762 1237 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AK3P4-201ENST00000504283 583 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 RNU6-551P-201ENST00000516661 103 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC124068.1-201ENST00000563131 678 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AP003117.1-201ENST00000602771 554 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 AC113403.1-201ENST00000604910 193 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 LINC00216-201ENST00000623548 1126 ntBASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
LRRC40Q9H9A6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL133243.3-201ENST00000617415 3004 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 MIR331-201ENST00000362302 94 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 RNA5SP505-201ENST00000364748 108 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 RPL23AP59-201ENST00000399415 461 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC069285.2-201ENST00000440210 275 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL138878.2-201ENST00000440581 1241 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC133473.1-201ENST00000455173 299 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 MTND2P28-201ENST00000457540 1044 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC104164.2-201ENST00000496953 495 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 SUMO1P1-201ENST00000497904 306 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC108145.1-201ENST00000503770 153 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC093770.1-201ENST00000511559 571 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC022790.1-201ENST00000522872 204 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL109766.1-201ENST00000555080 552 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AL035461.2-201ENST00000619201 524 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 MIR7703-201ENST00000620784 77 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AP000843.1-201ENST00000624880 701 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC140479.6-201ENST00000633535 357 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC011266.1-201ENST00000624119 3569 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 MFSD8-216ENST00000641147 4009 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.37□□□□□ -1.71
LRRC40Q9H9A6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC022893.2-201ENST00000564832 3296 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms