Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 RN7SL290P-201ENST00000578661 300 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AL031281.1-201ENST00000604049 488 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AP001437.1-201ENST00000608783 456 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AL136981.2-201ENST00000617319 734 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC116618.1-201ENST00000634617 774 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VPS11Q9H270 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
VPS11Q9H270 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS11Q9H270 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 SOCS5P3-201ENST00000425115 1576 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC100757.1-201ENST00000616872 1835 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS11Q9H270 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 GAPDHP24-201ENST00000328713 983 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS11Q9H270 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 RNY4P24-201ENST00000362735 96 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 U3.4-201ENST00000363352 213 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 RNU6-353P-201ENST00000364266 108 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 OR52E6-202ENST00000379946 954 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 Y_RNA.578-201ENST00000390903 88 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 PPIAP9-201ENST00000403866 498 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 RPSAP35-201ENST00000413753 818 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS11Q9H270 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS11Q9H270 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS11Q9H270 HIGD1AP12-201ENST00000427832 281 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 YWHAZP7-201ENST00000436906 631 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 UBE2V1P8-201ENST00000437166 265 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC092013.1-201ENST00000438795 332 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AMYP1-201ENST00000440059 1023 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC004865.1-201ENST00000442276 1003 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 TCEA1P3-201ENST00000443005 880 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AL606662.1-201ENST00000445763 553 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 TIMM8BP2-201ENST00000445940 251 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 EEF1B2P3-201ENST00000447718 678 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 AC002553.2-201ENST00000453217 340 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 FCF1P3-201ENST00000496394 590 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 MTCO2P30-201ENST00000503662 364 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS11Q9H270 AC117522.1-201ENST00000509821 380 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC074344.1-201ENST00000512823 224 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS11Q9H270 RNU6-405P-201ENST00000516637 110 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS11Q9H270 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS11Q9H270 TRIM51DP-201ENST00000529746 596 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 HSPE1P2-201ENST00000554777 306 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC087465.1-201ENST00000560574 245 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 DPPA2P4-201ENST00000563717 878 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 BGLT3-201ENST00000564523 994 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC090751.1-201ENST00000566966 267 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC079171.1-201ENST00000568788 914 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC022662.1-201ENST00000580252 331 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 MIR4311-201ENST00000580794 100 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC090312.2-201ENST00000582687 378 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 PSMA6P4-201ENST00000603247 718 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 BNIP3P4-201ENST00000604946 565 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS11Q9H270 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 AC023509.5-201ENST00000617434 807 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 MTND1P37-201ENST00000636562 264 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
VPS11Q9H270 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 ZNF680P1-201ENST00000436625 1469 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VPS11Q9H270 IFIT1P1-201ENST00000400497 1449 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 AC073429.2-201ENST00000569694 1444 ntBASIC5.56□□□□□ -1.52
VPS11Q9H270 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS11Q9H270 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms