Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL390316.1-201ENST00000406279 553 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC092745.2-202ENST00000411880 369 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RPL34P6-201ENST00000432390 345 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AL359955.2-201ENST00000445380 353 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RN7SL97P-201ENST00000486780 299 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC108120.2-201ENST00000512973 294 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RNY3P15-201ENST00000516297 97 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 TRAV15-201ENST00000556680 249 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 OR1F2P-201ENST00000570470 933 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 CTSLP2-201ENST00000580501 394 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AP005119.1-201ENST00000580956 292 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RN7SL475P-201ENST00000583379 298 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AL157899.1-201ENST00000604110 936 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC073046.2-201ENST00000604756 527 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 BCRP9-201ENST00000605312 388 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RNU6-87P-201ENST00000607561 108 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC096772.1-201ENST00000609146 564 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC005899.7-201ENST00000618199 588 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RPL23AP61-201ENST00000623642 466 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC073342.2-201ENST00000595842 1800 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC012513.3-201ENST00000623250 2116 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC122713.2-201ENST00000624942 3335 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 NLRP3P1-201ENST00000622303 1785 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC6.59□□□□□ -1.36
COL25A1Q9BXS0 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
COL25A1Q9BXS0 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL25A1Q9BXS0 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL25A1Q9BXS0 AC104964.2-201ENST00000562242 4641 ntBASIC6.59□□□□□ -1.36
COL25A1Q9BXS0 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 LINC00561-201ENST00000565815 2738 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 KARSP2-201ENST00000415696 1639 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RNA5SP46-201ENST00000362370 120 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 SNORA21-201ENST00000362423 132 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RNU6-1339P-201ENST00000363574 91 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RNU6-619P-201ENST00000365146 108 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RPL31P52-201ENST00000407532 367 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 C4BPAP2-201ENST00000428434 478 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC023347.2-201ENST00000433994 462 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC002553.3-201ENST00000453002 341 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC007967.1-201ENST00000455422 1159 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.653-201ENST00000459091 95 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RPL5P30-201ENST00000465511 891 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC010350.1-201ENST00000504908 231 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 OR4D12P-201ENST00000509361 911 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC022882.1-201ENST00000532142 501 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC024224.1-201ENST00000538284 609 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 NMNAT1P1-201ENST00000554095 876 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 HMGB1P6-201ENST00000569046 646 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 RN7SL208P-201ENST00000577964 296 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms