Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ADAM3B-201ENST00000569937 840 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 AC053481.4-201ENST00000583164 216 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 SCN1A-220ENST00000641603 12506 ntBASIC5.06□□□□□ -1.6
RPAP1Q9BWH6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 MIR554-201ENST00000384874 96 ntBASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 RN7SKP202-201ENST00000410439 330 ntBASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AL161631.1-201ENST00000417933 486 ntBASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AC091959.2-201ENST00000477363 321 ntBASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 HMGB3P13-201ENST00000511263 607 ntBASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 AC011266.1-201ENST00000624119 3569 ntBASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RPAP1Q9BWH6 MIR448-201ENST00000362131 111 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 LAP3P1-201ENST00000403648 294 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RPL23AP89-201ENST00000439324 255 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC025445.1-201ENST00000502728 300 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RNA5SP143-201ENST00000516936 115 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC133552.5-201ENST00000604266 540 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AL451086.1-201ENST00000605596 223 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AL356863.1-201ENST00000623378 1080 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 CDC27P2-201ENST00000425026 1922 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RNU11-4P-201ENST00000391149 133 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AP000357.1-201ENST00000409926 1165 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RNA5SP104-201ENST00000410989 118 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 TPT1P2-201ENST00000413105 503 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RPS12P5-201ENST00000423449 371 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC115285.1-201ENST00000424879 736 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 BX119904.1-201ENST00000432026 348 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RPL23AP46-201ENST00000438548 490 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 THAP12P8-201ENST00000447914 2115 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 AC124856.1-201ENST00000600819 896 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 MIR6875-201ENST00000617506 72 ntBASIC5.04□□□□□ -1.6
RPAP1Q9BWH6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 RLIMP1-201ENST00000339626 1680 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 MTND4P26-201ENST00000415971 1359 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 AC097504.1-201ENST00000515103 2415 ntBASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPAP1Q9BWH6 OR10J6P-201ENST00000289731 930 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms