Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 RNA5SP219-201ENST00000390940 113 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 DSTNP4-201ENST00000399472 474 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 RNU4-46P-201ENST00000410818 138 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AL139095.3-201ENST00000419672 1203 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC092651.1-201ENST00000426110 312 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 RPS15AP10-201ENST00000432472 382 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 RPL21P2-201ENST00000440049 481 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 MRPS21P1-201ENST00000453850 223 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 RN7SL228P-201ENST00000470060 303 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 RN7SL647P-201ENST00000485429 300 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 RNU4-77P-201ENST00000516692 156 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 RN7SL786P-201ENST00000579130 298 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 COX6CP3-201ENST00000580869 223 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AL031320.1-201ENST00000604177 357 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 IGHV3-29-201ENST00000604817 344 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AP005329.3-201ENST00000609924 686 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC012488.1-201ENST00000611221 640 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AL445363.3-201ENST00000623080 671 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC087893.2-201ENST00000623272 255 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
USB1Q9BQ65 TUBBP10-201ENST00000427668 1301 ntBASIC6.75□□□□□ -1.33
USB1Q9BQ65 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
USB1Q9BQ65 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 MIR1302-6-201ENST00000408466 90 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 BCRP8-201ENST00000412037 255 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 RPL7P46-201ENST00000425129 740 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 CR391992.1-201ENST00000438601 394 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 HMGB3P21-201ENST00000452483 547 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 RN7SL809P-201ENST00000482040 297 ntBASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.74□□□□□ -1.33
USB1Q9BQ65 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms