Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AP000873.5-201ENST00000533906 236 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC083899.3-201ENST00000603413 594 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AL596327.1-201ENST00000603629 213 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC103591.3-201ENST00000608684 209 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC116447.1-201ENST00000613153 453 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC126175.1-201ENST00000617041 758 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 AL359715.5-201ENST00000623431 443 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 AC016583.1-201ENST00000624221 2431 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 SOCS5P3-201ENST00000425115 1576 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK1Q99986 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC092104.1-201ENST00000497346 1441 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 MTND5P24-201ENST00000438892 1767 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC005224.3-201ENST00000584683 2140 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AP001029.2-203ENST00000589795 4910 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC009962.1-201ENST00000567327 3813 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VRK1Q99986 AP000756.2-201ENST00000624168 2567 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 RPL21P132-201ENST00000331267 462 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 RNA5SP88-201ENST00000365560 109 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 Y_RNA.559-201ENST00000384686 107 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC016739.1-201ENST00000405359 345 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC073264.1-201ENST00000411508 416 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK1Q99986 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 RPL5P25-201ENST00000441148 775 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 MED28P3-201ENST00000444288 531 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 HMGN1P36-201ENST00000446623 298 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 ACA64.4-201ENST00000459070 127 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 RN7SL188P-201ENST00000469842 285 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC090013.1-201ENST00000485147 480 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 HMGN2P25-201ENST00000486956 268 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 GAPDHP62-201ENST00000515313 990 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AP000790.1-201ENST00000528891 737 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC074051.3-201ENST00000570238 358 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 RNU6-88P-201ENST00000606801 100 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AP001521.1-201ENST00000609150 300 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AP000254.1-201ENST00000609934 520 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC008121.2-201ENST00000614647 523 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
VRK1Q99986 AL392088.2-201ENST00000637607 285 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 XPOTP1-201ENST00000443317 2398 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 AL079343.1-201ENST00000572358 1771 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
VRK1Q99986 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK1Q99986 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK1Q99986 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK1Q99986 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms