Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 HMGB3P11-201ENST00000440127 604 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 RPL7P52-201ENST00000449200 742 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 RNU6-256P-201ENST00000516747 97 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 NDUFA3P4-201ENST00000560814 250 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 TVP23CP2-201ENST00000571473 623 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL008729.2-201ENST00000606393 473 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC087894.3-201ENST00000623682 349 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC130448.2-201ENST00000624082 374 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC002525.1-201ENST00000624392 1622 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL034417.4-202ENST00000642135 2236 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 BX322650.1-201ENST00000332359 2143 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC020904.2-202ENST00000614660 1401 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 OR51A10P-201ENST00000307165 937 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 RNA5SP382-201ENST00000363355 112 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 Y_RNA.234-201ENST00000364409 97 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 Y_RNA.378-201ENST00000365652 113 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 RNU6-601P-201ENST00000384540 107 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 Y_RNA.574-201ENST00000384766 95 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 MIR137-201ENST00000385223 102 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 EIF4E2P1-201ENST00000393781 255 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 HMGN1P24-201ENST00000412282 298 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL591848.1-201ENST00000413092 322 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC093151.1-201ENST00000427711 313 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 RPL7L1P10-201ENST00000427790 463 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC018804.1-201ENST00000430381 618 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC007679.3-201ENST00000434035 414 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL359265.2-201ENST00000434367 631 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 RPL36AP6-201ENST00000435770 321 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 RPL23AP43-201ENST00000446445 471 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL161722.1-201ENST00000446972 1032 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 MIR2053-201ENST00000459295 91 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 RNU4ATAC7P-201ENST00000516280 125 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 CYCSP22-201ENST00000517555 339 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC090136.1-201ENST00000520009 240 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL137161.1-201ENST00000532231 390 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC023043.2-201ENST00000589678 1026 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC006967.3-201ENST00000594086 1093 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 AC011445.2-201ENST00000599274 173 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL596245.1-201ENST00000618994 362 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 HSPA8P14-201ENST00000552265 1805 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL161891.1-201ENST00000621575 4636 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL445437.1-201ENST00000623157 3087 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 AL592148.3-201ENST00000608771 2646 ntBASIC7.28□□□□□ -1.24
PHOX2BQ99453 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PHOX2BQ99453 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PHOX2BQ99453 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms