Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AL389895.1-201ENST00000554127 252 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 MIR4489-201ENST00000578869 62 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC005084.1-201ENST00000605160 304 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC010857.1-201ENST00000606398 594 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AC025175.1-201ENST00000606482 759 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 AL021997.2-201ENST00000615674 271 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 C2orf27A-204ENST00000623058 969 ntBASIC3.11□□□□□ -1.91
AP1S3Q96PC3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.11□□□□□ -1.91
AP1S3Q96PC3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RN7SKP103-201ENST00000363848 320 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RNA5SP105-201ENST00000391123 113 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 SNRPFP1-201ENST00000414761 252 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RPL23AP27-201ENST00000415161 451 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AIMP1P1-201ENST00000418670 937 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RPS12P23-201ENST00000419579 400 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC079355.1-201ENST00000421770 223 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 USP9YP31-201ENST00000431405 881 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RNU7-170P-201ENST00000459303 61 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RPL9P32-201ENST00000464118 620 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RPL7P22-201ENST00000466005 733 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 IGKV1-32-201ENST00000519290 311 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC109635.6-201ENST00000525487 1113 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 OR5BC1P-201ENST00000529327 739 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AP001781.1-201ENST00000530977 207 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 PDCL2P2-201ENST00000533651 189 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 PCNPP1-201ENST00000552501 511 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AL109766.1-201ENST00000555080 552 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 UBE2FP2-201ENST00000566646 462 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC079587.1-201ENST00000603846 277 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AL592295.2-201ENST00000612578 206 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 MIR6891-201ENST00000618788 93 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AP005019.3-201ENST00000620418 560 ntBASIC3.1□□□□□ -1.91
AP1S3Q96PC3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.1□□□□□ -1.91
AP1S3Q96PC3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 SNORA51.8-201ENST00000384234 132 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 MIR659-201ENST00000384963 97 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC097374.1-203ENST00000400783 485 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AL049610.1-201ENST00000423374 372 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC073648.4-201ENST00000442655 781 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 CEACAMP4-201ENST00000457676 421 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AP001086.1-201ENST00000494882 321 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 BNIP3P41-201ENST00000503774 571 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AP000676.2-201ENST00000529711 301 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms