Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 SCN1A-220ENST00000641603 12506 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VMP1Q96GC9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VMP1Q96GC9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VMP1Q96GC9 MARK2P15-201ENST00000432204 2186 ntBASIC4.65□□□□□ -1.66
VMP1Q96GC9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VMP1Q96GC9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VMP1Q96GC9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.65□□□□□ -1.66
VMP1Q96GC9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 SNORA70.10-201ENST00000384515 134 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 RPL23AP59-201ENST00000399415 461 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 LAP3P1-201ENST00000403648 294 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC092832.1-201ENST00000422934 400 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 FABP7P1-201ENST00000424004 391 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 RPS26P2-201ENST00000440331 348 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC073648.4-201ENST00000442655 781 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 EIF2S2P2-201ENST00000447161 982 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VMP1Q96GC9 OTX2P1-201ENST00000450956 354 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC008280.2-201ENST00000455473 307 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC005008.1-201ENST00000456151 612 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC087385.1-201ENST00000475062 312 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC231760.1-201ENST00000498002 260 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VMP1Q96GC9 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 FTH1P9-201ENST00000513251 355 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC012339.2-201ENST00000523996 453 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC106734.1-201ENST00000568646 663 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 TVP23CP2-201ENST00000571473 623 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AC091979.2-201ENST00000607514 214 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 MIR4496-201ENST00000635896 61 ntBASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VMP1Q96GC9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VMP1Q96GC9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VMP1Q96GC9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.65□□□□□ -1.67
VMP1Q96GC9 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VMP1Q96GC9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VMP1Q96GC9 RNU6-792P-201ENST00000363490 107 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 SNORA51.8-201ENST00000384234 132 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 COX6B1P1-201ENST00000415962 213 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 CYP4F29P-201ENST00000420685 446 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 RPL7P53-201ENST00000421245 739 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 RPL7P4-203ENST00000430239 730 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 NMNAT1P2-201ENST00000435192 860 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 TXNP5-201ENST00000441043 315 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC004865.1-201ENST00000442276 1003 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 RN7SL817P-201ENST00000480777 288 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 SNX5P1-201ENST00000505757 1041 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 STMN1P2-201ENST00000508435 439 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC008885.2-201ENST00000509506 930 ntBASIC4.64□□□□□ -1.67
VMP1Q96GC9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.64□□□□□ -1.67
VMP1Q96GC9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms