Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-146P-201ENST00000384602 108 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AL034403.1-201ENST00000399414 885 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 RPL23AP48-201ENST00000406913 488 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 RNA5SP146-201ENST00000410743 123 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AL590806.1-201ENST00000415818 853 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC007064.3-201ENST00000422608 359 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 RPS29P19-201ENST00000479709 171 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC027176.2-201ENST00000559166 746 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC019131.2-201ENST00000609071 870 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC023509.5-201ENST00000617434 807 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 MIR7151-201ENST00000617477 60 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 RMST_5.1-201ENST00000618704 126 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 AC092079.1-201ENST00000558620 1985 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ECHDC3Q96DC8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.21□□□□□ -1.73
ECHDC3Q96DC8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.21□□□□□ -1.73
ECHDC3Q96DC8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ECHDC3Q96DC8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.21□□□□□ -1.73
ECHDC3Q96DC8 AC012020.1-201ENST00000624541 1728 ntBASIC4.21□□□□□ -1.73
ECHDC3Q96DC8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 RNU1-94P-201ENST00000362627 173 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 RPS26P8-201ENST00000393490 348 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AL392003.1-201ENST00000434394 243 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 EIF2S2P5-201ENST00000457635 968 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 PRELID3BP5-201ENST00000508612 460 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 SNORA31.9-201ENST00000516429 84 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC068714.1-201ENST00000559623 800 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC017076.1-201ENST00000607613 578 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC090506.2-201ENST00000624521 419 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC010329.2-201ENST00000595195 2737 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 AC007342.7-201ENST00000624610 2337 ntBASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ECHDC3Q96DC8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AL121657.1-201ENST00000327215 531 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 AL034374.1-201ENST00000406329 351 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 OR8G2P-201ENST00000412796 908 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 CASKP1-201ENST00000412870 582 ntBASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.2□□□□□ -1.74
ECHDC3Q96DC8 RPS23P10-201ENST00000416185 486 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms