Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CEACAMP4-201ENST00000457676 421 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 AP000873.1-201ENST00000463987 400 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 BX284632.1-201ENST00000478218 541 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.6□□□□□ -1.83
AP3S1Q92572 AP001086.1-201ENST00000494882 321 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.6□□□□□ -1.83
AP3S1Q92572 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.6□□□□□ -1.83
AP3S1Q92572 AC022790.1-201ENST00000522872 204 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S1Q92572 AC021006.3-201ENST00000530771 192 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.6□□□□□ -1.83
AP3S1Q92572 AC244100.4-201ENST00000617747 388 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 AL359742.1-201ENST00000622497 540 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S1Q92572 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.6□□□□□ -1.83
AP3S1Q92572 AC008013.2-202ENST00000637965 364 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S1Q92572 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S1Q92572 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S1Q92572 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S1Q92572 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S1Q92572 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S1Q92572 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.6□□□□□ -1.83
AP3S1Q92572 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP3S1Q92572 INTS6P1-201ENST00000504674 2530 ntBASIC3.6□□□□□ -1.83
AP3S1Q92572 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 AC025031.4-201ENST00000621248 3271 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AP3S1Q92572 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S1Q92572 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S1Q92572 RNU1-106P-201ENST00000384382 164 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 MT-TP-201ENST00000387461 68 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 RNA5SP397-201ENST00000391323 118 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 ATP5F1P4-201ENST00000397288 746 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S1Q92572 AC004074.1-201ENST00000421810 1063 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
AP3S1Q92572 HMGB3P5-201ENST00000428894 612 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 NFYAP1-201ENST00000431953 972 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S1Q92572 CALM1P2-201ENST00000452941 448 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 DHFRP3-201ENST00000455595 559 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S1Q92572 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
AP3S1Q92572 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S1Q92572 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 RPL29P14-201ENST00000495837 428 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 SNX5P1-201ENST00000505757 1041 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S1Q92572 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.59□□□□□ -1.83
AP3S1Q92572 AC087888.1-201ENST00000550884 1254 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 RPL23AP87-202ENST00000573039 466 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC099489.2-201ENST00000574976 260 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AP001180.3-201ENST00000582221 145 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC069366.1-201ENST00000583159 838 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC020910.2-201ENST00000603635 610 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AL451044.1-201ENST00000604867 238 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC103710.3-201ENST00000608157 948 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.59□□□□□ -1.83
AP3S1Q92572 AL592494.3-201ENST00000609485 464 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 MIR6780B-201ENST00000610307 79 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 AC105105.5-201ENST00000622635 1294 ntBASIC3.59□□□□□ -1.83
AP3S1Q92572 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
AP3S1Q92572 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
AP3S1Q92572 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
AP3S1Q92572 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3S1Q92572 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3S1Q92572 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.58□□□□□ -1.84
AP3S1Q92572 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP3S1Q92572 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.58□□□□□ -1.84
AP3S1Q92572 AC136624.1-201ENST00000400791 413 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
AP3S1Q92572 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.58□□□□□ -1.84
AP3S1Q92572 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.58□□□□□ -1.84
AP3S1Q92572 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP3S1Q92572 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.58□□□□□ -1.84
AP3S1Q92572 NPM1P34-201ENST00000428821 893 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3S1Q92572 AL162151.2-201ENST00000448875 158 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 TVP23BP2-201ENST00000455082 615 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 AC005229.2-201ENST00000456995 399 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 SNORD108-201ENST00000459332 71 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 AC063943.1-201ENST00000465434 453 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 PPIAP15-201ENST00000479662 484 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 UBA52P7-201ENST00000486088 380 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 TRAV31-201ENST00000502780 342 ntBASIC3.58□□□□□ -1.84
AP3S1Q92572 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.58□□□□□ -1.84
AP3S1Q92572 KCTD9P2-201ENST00000512203 1013 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms