Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 HSFY4P-201ENST00000415994 1181 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 MTND2P15-201ENST00000418575 892 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 EIF4EP1-201ENST00000422311 642 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 AL591503.2-201ENST00000442314 1005 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 AL591363.1-201ENST00000450091 483 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 AC018635.1-201ENST00000468292 1030 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 RPL29P14-201ENST00000495837 428 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 AC037471.2-201ENST00000564941 598 ntBASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ALMS1Q8TCU4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AL031121.1-201ENST00000406553 254 ntBASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AC062016.2-201ENST00000420950 676 ntBASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 OR6C71P-201ENST00000432580 913 ntBASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 RPS26P28-201ENST00000470806 348 ntBASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AC022146.1-201ENST00000595307 847 ntBASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
ALMS1Q8TCU4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC022417.1-201ENST00000624768 1303 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 MIR128-1-201ENST00000384921 82 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 HMGB2P1-201ENST00000591146 634 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 RN7SKP141-201ENST00000516167 338 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC120036.2-201ENST00000509729 1474 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC000123.3-201ENST00000624029 4975 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 HMGB3P19-201ENST00000403971 560 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC006994.1-201ENST00000438212 839 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 RPL6P9-201ENST00000466502 859 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 RPL7P1-201ENST00000468161 747 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC112206.1-201ENST00000468416 477 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC007458.1-201ENST00000542812 373 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 YPEL5P2-201ENST00000605553 359 ntBASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ALMS1Q8TCU4 AC005332.5-201ENST00000591222 2919 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC083899.2-201ENST00000423285 1376 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC005300.1-201ENST00000428401 373 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 RPS4XP12-201ENST00000461747 709 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 RPL21P8-201ENST00000465083 535 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC108751.2-201ENST00000469993 231 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 RPS3AP6-201ENST00000484430 795 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP249-201ENST00000516127 99 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 AL137849.1-201ENST00000604767 169 ntBASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ALMS1Q8TCU4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms