Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC091912.1-201ENST00000511351 248 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 SEPT10P1-201ENST00000517342 1162 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 IGKV2D-10-201ENST00000520194 281 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC092851.1-201ENST00000535964 478 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 NMNAT1P1-201ENST00000554095 876 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AL121839.1-201ENST00000556233 1185 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AADACP1-206ENST00000561502 1193 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 MIR4284-201ENST00000578924 81 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 RPL26P30-202ENST00000602923 645 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC008814.1-201ENST00000603797 406 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AL391358.1-201ENST00000605342 190 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AP002360.4-201ENST00000606980 481 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC011374.2-201ENST00000607135 526 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC073114.1-201ENST00000612027 490 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AL158063.1-201ENST00000615349 536 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AL158062.1-201ENST00000619632 745 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC092192.1-201ENST00000633154 1018 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 FP325313.1-201ENST00000638228 703 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 AC005005.4-201ENST00000623789 16698 ntBASIC5.29□□□□□ -1.56
SLC44A3Q8N4M1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC009962.1-201ENST00000567327 3813 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 GVINP1-202ENST00000531871 7271 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 OR5H15-201ENST00000383696 930 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AL590084.2-201ENST00000401481 382 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 RNA5SP113-201ENST00000410486 84 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 HMGB3P31-201ENST00000413333 595 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC098592.1-201ENST00000419352 333 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC138761.5-201ENST00000433967 325 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 RPS24P1-201ENST00000438550 371 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 MRPL42P4-201ENST00000453267 443 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 snoU13.1-201ENST00000459157 104 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 LINC00888-204ENST00000487386 421 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 RN7SKP141-201ENST00000516167 338 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 MIR5096-201ENST00000583713 70 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC008759.1-201ENST00000589783 983 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AP001521.2-201ENST00000608772 546 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC004223.4-201ENST00000612426 332 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC005332.10-201ENST00000612725 619 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC139769.3-201ENST00000618383 175 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC099654.6-201ENST00000636487 512 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 MTCO1P18-201ENST00000455518 1419 ntBASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AP005435.3-201ENST00000531260 3198 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms