Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC65Q8IXS2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC65Q8IXS2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC65Q8IXS2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC65Q8IXS2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 RNA5SP388-201ENST00000362584 119 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 RNA5SP366-201ENST00000365454 123 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 OR13C3-201ENST00000374781 1108 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 RN7SKP182-201ENST00000410772 298 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 CASKP1-201ENST00000412870 582 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 TPT1P13-201ENST00000449760 499 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 FCF1P7-201ENST00000451185 558 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 EIF2S2P4-201ENST00000461070 984 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC006463.2-201ENST00000473326 348 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC105233.3-201ENST00000531125 744 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC084757.1-201ENST00000559987 490 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC008638.3-201ENST00000603341 463 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AL161729.3-201ENST00000603533 673 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC117490.2-201ENST00000610042 594 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC114781.5-201ENST00000615297 108 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AC008785.1-201ENST00000624475 456 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 AP000843.1-201ENST00000624880 701 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 MIR7641-1-201ENST00000627518 61 ntBASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC65Q8IXS2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC095050.2-201ENST00000510748 1458 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 RNA5SP52-201ENST00000362448 134 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 RPL18P10-201ENST00000425606 538 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC006517.1-201ENST00000480485 328 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC041039.1-201ENST00000485656 536 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AF213884.1-201ENST00000488102 463 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 MIR4700-201ENST00000578311 74 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 MIR4284-201ENST00000578924 81 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 FAM60CP-201ENST00000591086 664 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC010435.1-201ENST00000623353 1177 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC007529.1-201ENST00000418574 2178 ntBASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC65Q8IXS2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 RNU6-146P-201ENST00000384602 108 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 CLIC4P1-201ENST00000453177 535 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC109327.1-201ENST00000471666 403 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC147055.1-201ENST00000509261 750 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms