Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 VDAC1P6-201ENST00000430062 855 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 MTCO1P54-201ENST00000430139 712 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 MTCO3P21-201ENST00000430791 643 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 MTND2P25-201ENST00000449028 610 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 RPL7P61-201ENST00000451721 751 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC010326.1-201ENST00000462726 602 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 RPS29P19-201ENST00000479709 171 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC146944.2-203ENST00000502493 354 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 CDH12P2-201ENST00000504393 298 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC139495.1-202ENST00000513164 354 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 OR7H2P-201ENST00000513483 306 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AP001922.4-201ENST00000526967 290 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 OR5AN2P-201ENST00000534535 896 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC074029.2-201ENST00000551045 634 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 PCNPP1-201ENST00000552501 511 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 PSMA6P4-201ENST00000603247 718 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC128687.2-201ENST00000609657 566 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC008013.2-202ENST00000637965 364 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AC119674.1-220ENST00000641502 1048 ntBASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUDCD3Q8IVD9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 AC092162.3-201ENST00000624511 1624 ntBASIC4.15□□□□□ -1.74
NUDCD3Q8IVD9 MARK2P15-201ENST00000432204 2186 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 FAM3C2-201ENST00000312214 681 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 MIR331-201ENST00000362302 94 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 MIR3074-201ENST00000384885 81 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AL109941.1-201ENST00000401925 229 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 ZNF603P-201ENST00000405613 487 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AMZ2P2-201ENST00000406819 1057 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 SNORA11F-201ENST00000408237 128 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC073648.4-201ENST00000442655 781 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AL512326.1-201ENST00000443050 721 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 RPL36AP15-201ENST00000444514 266 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 RPL7P31-201ENST00000450192 724 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 RPS3AP53-201ENST00000454716 778 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 RPL21P126-201ENST00000470049 478 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 RPL23AP71-201ENST00000470966 469 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 FABP5P6-201ENST00000510588 409 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 ACTR6P1-201ENST00000514311 1104 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 IGKV1-32-201ENST00000519290 311 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC007599.1-201ENST00000568688 1174 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC110743.1-201ENST00000584870 478 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AL021707.7-201ENST00000607991 416 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 AC133644.2-201ENST00000608142 540 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 uc_338.13-201ENST00000618243 179 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 USP9YP4-201ENST00000424401 1745 ntBASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.15□□□□□ -1.75
NUDCD3Q8IVD9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 OR5P1P-201ENST00000299512 925 ntBASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUDCD3Q8IVD9 MIR92A2-201ENST00000385299 75 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms