Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 CDY3P-201ENST00000454543 1618 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AL160175.1-201ENST00000428124 247 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 RPL7P24-201ENST00000493052 752 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC093815.1-201ENST00000508637 280 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC079171.1-201ENST00000568788 914 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 MIR8057-201ENST00000620957 69 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC093719.1-202ENST00000392735 373 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC005726.1-201ENST00000494679 427 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 RPL29P14-201ENST00000495837 428 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC118465.1-201ENST00000513820 1271 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 UBE2V1P2-201ENST00000397758 440 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 PEX12P1-201ENST00000400284 1048 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AL161631.1-201ENST00000417933 486 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC073063.1-201ENST00000434352 607 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC006511.1-201ENST00000470614 315 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 RNA5SP497-201ENST00000516081 97 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC022655.2-201ENST00000577280 318 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC006504.3-201ENST00000586818 523 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC136601.2-201ENST00000604356 474 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC019278.1-201ENST00000623516 479 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 NCOA4P2-201ENST00000340589 1813 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC017079.2-201ENST00000416102 485 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 BX119904.3-201ENST00000428194 957 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 RAD23BP3-201ENST00000454157 1152 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC087369.1-201ENST00000520775 996 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 DPPA3P2-201ENST00000553589 478 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AC012417.1-201ENST00000582307 1039 ntBASIC2.69□□□□□ -1.98
CSMD3Q7Z407 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CSMD3Q7Z407 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AP003122.5-201ENST00000527668 3766 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 EIF4A1P1-201ENST00000420241 934 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC010285.3-201ENST00000511668 676 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC090246.1-201ENST00000616499 426 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms