Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SSBP1Q04837 AC009229.4-201ENST00000623854 1947 ntBASIC3.25□□□□□ -1.89
SSBP1Q04837 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 AC063923.1-201ENST00000478982 1619 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.24□□□□□ -1.89
SSBP1Q04837 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 AL590704.1-201ENST00000402856 794 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AMZ2P2-201ENST00000406819 1057 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.24□□□□□ -1.89
SSBP1Q04837 RPL23AP1-201ENST00000428990 471 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 RPL12P28-201ENST00000430852 489 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AL513533.1-201ENST00000453728 415 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AC099563.1-201ENST00000456086 418 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AC087312.1-201ENST00000471411 480 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.24□□□□□ -1.89
SSBP1Q04837 RPS3AP50-201ENST00000487064 803 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AC004453.1-201ENST00000487895 408 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.24□□□□□ -1.89
SSBP1Q04837 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.24□□□□□ -1.89
SSBP1Q04837 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
SSBP1Q04837 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.24□□□□□ -1.89
SSBP1Q04837 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP1Q04837 AL445222.1-201ENST00000607259 628 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 MIR6868-201ENST00000611215 58 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP1Q04837 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP1Q04837 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.24□□□□□ -1.89
SSBP1Q04837 AC007342.7-201ENST00000624610 2337 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 CDY11P-201ENST00000447168 1651 ntBASIC3.24□□□□□ -1.89
SSBP1Q04837 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP1Q04837 RNA5SP435-201ENST00000364044 108 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 RNU1-132P-201ENST00000364300 164 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.23□□□□□ -1.89
SSBP1Q04837 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.23□□□□□ -1.89
SSBP1Q04837 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
SSBP1Q04837 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
SSBP1Q04837 RNU6-55P-201ENST00000411092 107 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 RNU6-954P-201ENST00000411355 107 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.23□□□□□ -1.89
SSBP1Q04837 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.23□□□□□ -1.89
SSBP1Q04837 RPL7P48-201ENST00000461513 746 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 RPL6P9-201ENST00000466502 859 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 RN7SL354P-201ENST00000469282 294 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 RPL7L1P8-201ENST00000469911 741 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.23□□□□□ -1.89
SSBP1Q04837 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP1Q04837 RNA5SP164-201ENST00000516533 110 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.23□□□□□ -1.89
SSBP1Q04837 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
SSBP1Q04837 YPEL5P3-201ENST00000547227 352 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP1Q04837 RPL12P25-202ENST00000598100 674 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 AC005191.1-201ENST00000603950 358 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP1Q04837 AC133644.2-201ENST00000608142 540 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 uc_338.32-201ENST00000615087 172 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 AC100827.5-201ENST00000615883 426 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.23□□□□□ -1.89
SSBP1Q04837 CDRT1-208ENST00000630868 794 ntBASIC3.23□□□□□ -1.89
SSBP1Q04837 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SSBP1Q04837 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
SSBP1Q04837 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP1Q04837 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP1Q04837 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP1Q04837 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SSBP1Q04837 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SSBP1Q04837 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 RARSP1-201ENST00000542842 1418 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 USP8P1-201ENST00000494673 3183 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP1Q04837 AC009237.5-201ENST00000414271 501 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.22□□□□□ -1.89
SSBP1Q04837 AL590139.1-201ENST00000416267 400 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AC108032.1-201ENST00000416706 207 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AL158071.1-201ENST00000430315 461 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 RPS3AP54-201ENST00000435535 734 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP1Q04837 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP1Q04837 OR52Y1P-201ENST00000452418 828 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.22□□□□□ -1.89
SSBP1Q04837 RPL23AP24-201ENST00000458203 385 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AC010468.1-201ENST00000461022 817 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP1Q04837 PRELID3BP7-201ENST00000503606 469 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP1Q04837 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 OR5AP1P-201ENST00000529730 940 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP1Q04837 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SSBP1Q04837 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP1Q04837 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.22□□□□□ -1.89
SSBP1Q04837 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SSBP1Q04837 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms