Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS1Q01581 Z82217.1-201ENST00000625157 8149 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGCS1Q01581 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS1Q01581 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS1Q01581 MTCO1P8-201ENST00000416914 1523 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGCS1Q01581 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 MARK2P15-201ENST00000432204 2186 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 RNU1-132P-201ENST00000364300 164 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 HSPD1P16-201ENST00000402302 394 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 RNA5SP104-201ENST00000410989 118 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 TRIM60P17-201ENST00000415181 719 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC004552.1-201ENST00000419089 348 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC244453.4-201ENST00000419150 388 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 Z85994.2-201ENST00000434327 452 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 XKRYP6-201ENST00000440468 1116 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 ELOCP10-201ENST00000440624 327 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 XKRYP3-201ENST00000442113 1116 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 RAD1P2-201ENST00000446414 663 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 RAB28P3-201ENST00000448325 597 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 RPS26P3-201ENST00000470205 348 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC090543.2-201ENST00000483963 348 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC004057.1-201ENST00000485827 348 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC093824.1-201ENST00000508796 343 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 KCTD9P2-201ENST00000512203 1013 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 IGHV3-63-201ENST00000518422 341 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 HIGD1AP5-201ENST00000529959 259 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 TVP23BP1-201ENST00000557500 617 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC018552.3-201ENST00000567416 561 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 MTATP6P25-201ENST00000574491 261 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC022655.2-201ENST00000577280 318 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC005229.3-201ENST00000603438 323 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 ELOCP34-201ENST00000604436 327 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC079791.1-201ENST00000605356 973 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AL121890.3-201ENST00000618494 516 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 AC010300.1-201ENST00000600671 5134 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 MAPK10-253ENST00000641010 4072 ntBASIC3.99□□□□□ -1.77
HMGCS1Q01581 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGCS1Q01581 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGCS1Q01581 Z73965.1-201ENST00000623412 2297 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCS1Q01581 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 PHKBP1-201ENST00000450951 1951 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 AC126755.2-208ENST00000327792 462 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 AC138969.1-213ENST00000331436 462 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 MIR365B-201ENST00000362317 111 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 DHFRP5-201ENST00000406944 564 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 RNU4-25P-201ENST00000410569 230 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 PGBD4P8-201ENST00000412993 562 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 AC011933.1-201ENST00000413334 321 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGCS1Q01581 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 VDAC1P6-201ENST00000430062 855 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 AC073143.1-201ENST00000436316 395 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 RPL12P46-201ENST00000436610 195 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 RPL23AP46-201ENST00000438548 490 ntBASIC3.98□□□□□ -1.77
HMGCS1Q01581 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGCS1Q01581 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms