Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN7AQ01118 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SCN7AQ01118 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SCN7AQ01118 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SCN7AQ01118 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN7AQ01118 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN7AQ01118 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SCN7AQ01118 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN7AQ01118 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SCN7AQ01118 RNA5SP72-201ENST00000364442 117 ntBASIC4.86□□□□□ -1.63
SCN7AQ01118 RNU2-65P-201ENST00000410162 185 ntBASIC4.86□□□□□ -1.63
SCN7AQ01118 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN7AQ01118 AC115115.1-201ENST00000449927 248 ntBASIC4.86□□□□□ -1.63
SCN7AQ01118 AC007967.1-201ENST00000455422 1159 ntBASIC4.86□□□□□ -1.63
SCN7AQ01118 AC021146.3-201ENST00000511911 260 ntBASIC4.86□□□□□ -1.63
SCN7AQ01118 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN7AQ01118 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.86□□□□□ -1.63
SCN7AQ01118 MIR3200-201ENST00000580767 85 ntBASIC4.86□□□□□ -1.63
SCN7AQ01118 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN7AQ01118 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN7AQ01118 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN7AQ01118 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN7AQ01118 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 AL121839.2-201ENST00000565058 6943 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 MAPK10-320ENST00000641462 6696 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN7AQ01118 AC117434.1-201ENST00000419971 836 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 PDSS1P1-201ENST00000422953 1114 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 HSPD1P21-201ENST00000436541 245 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 AC106707.2-201ENST00000484182 374 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN7AQ01118 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN7AQ01118 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN7AQ01118 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN7AQ01118 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN7AQ01118 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.85□□□□□ -1.63
SCN7AQ01118 AC055839.1-201ENST00000634467 498 ntBASIC4.85□□□□□ -1.63
SCN7AQ01118 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN7AQ01118 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SCN7AQ01118 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN7AQ01118 RNU1-15P-201ENST00000353977 144 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN7AQ01118 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN7AQ01118 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN7AQ01118 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN7AQ01118 AL353748.1-201ENST00000440753 474 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 PDSS1P2-201ENST00000449397 678 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN7AQ01118 PSMC1P13-201ENST00000458195 985 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 RN7SL293P-201ENST00000481765 281 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 CAB39P1-201ENST00000502277 460 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN7AQ01118 AC008802.1-201ENST00000519121 791 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN7AQ01118 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN7AQ01118 AC084759.1-201ENST00000561168 290 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN7AQ01118 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN7AQ01118 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN7AQ01118 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN7AQ01118 AC006484.1-201ENST00000435086 1884 ntBASIC4.84□□□□□ -1.63
SCN7AQ01118 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN7AQ01118 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.84□□□□□ -1.64
SCN7AQ01118 AC023632.6-201ENST00000624338 2177 ntBASIC4.84□□□□□ -1.64
SCN7AQ01118 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SCN7AQ01118 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SCN7AQ01118 VDAC2P1-201ENST00000399358 958 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 RNA5SP146-201ENST00000410743 123 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 CYCSP4-201ENST00000429682 331 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 MAPRE1P3-201ENST00000435438 796 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN7AQ01118 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN7AQ01118 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN7AQ01118 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN7AQ01118 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN7AQ01118 AC020914.6-201ENST00000594327 272 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 AC243654.2-201ENST00000612843 443 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 MIR7975-201ENST00000619350 68 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SCN7AQ01118 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN7AQ01118 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN7AQ01118 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN7AQ01118 AL035425.3-201ENST00000564206 4996 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 MIR490-201ENST00000384865 128 ntBASIC4.83□□□□□ -1.64
SCN7AQ01118 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN7AQ01118 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN7AQ01118 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN7AQ01118 AC016839.1-201ENST00000578162 867 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms