Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC016716.1-201ENST00000265882 708 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC011155.1-201ENST00000316512 456 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CX3CL1P78423 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CX3CL1P78423 RNU6-171P-201ENST00000384354 107 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CX3CL1P78423 SNORA68.2-201ENST00000391263 128 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 RN7SKP16-201ENST00000410180 299 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 COX6CP13-201ENST00000428703 226 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 RPL37P1-201ENST00000432310 284 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC084290.1-201ENST00000434995 374 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AL589765.3-201ENST00000446084 462 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 HMGB1P48-201ENST00000446155 598 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC004980.3-201ENST00000447046 365 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 Z73417.1-201ENST00000447373 778 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC004022.1-201ENST00000447766 1066 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 RPL23AP15-201ENST00000450202 459 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC079776.3-201ENST00000450665 370 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AURKAPS1-201ENST00000451805 1212 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 RPS18P6-201ENST00000476880 458 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 FTH1P24-201ENST00000503502 462 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 SNRPCP2-201ENST00000504370 475 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC073358.1-201ENST00000505671 684 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC048346.1-201ENST00000510247 144 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC109471.1-201ENST00000511631 612 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC092593.2-201ENST00000513866 913 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC105031.1-201ENST00000518550 476 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
CX3CL1P78423 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 OR4A2P-201ENST00000527276 913 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC090022.1-201ENST00000546569 311 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CL1P78423 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CL1P78423 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 RPSAP73-201ENST00000614820 330 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC079395.3-201ENST00000615161 484 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AC108359.1-201ENST00000616451 1211 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC009318.3-201ENST00000616916 503 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AC013470.4-201ENST00000619978 986 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.06□□□□□ -1.76
CX3CL1P78423 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 AL157770.1-201ENST00000623049 439 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AL355480.1-201ENST00000629041 99 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 CR788268.1-201ENST00000603931 1809 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CL1P78423 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CX3CL1P78423 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CL1P78423 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 AL590763.1-201ENST00000398297 1545 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.05□□□□□ -1.76
CX3CL1P78423 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CX3CL1P78423 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 DCAF13P3-201ENST00000561147 1334 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 HMGB1P5-201ENST00000255320 642 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CX3CL1P78423 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 RNU6-839P-201ENST00000363347 108 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 RNU4-92P-201ENST00000363783 136 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 SNORA2.3-201ENST00000383920 135 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 RN7SKP114-201ENST00000410327 279 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC019050.1-201ENST00000418508 492 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AL139148.1-201ENST00000427122 680 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CL1P78423 RPL12P28-201ENST00000430852 489 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms