Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.63□□□□□ -1.83
HIST1H3AP68431 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HIST1H3AP68431 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HIST1H3AP68431 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.63□□□□□ -1.83
HIST1H3AP68431 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.63□□□□□ -1.83
HIST1H3AP68431 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HIST1H3AP68431 MIR3653-201ENST00000625572 110 ntBASIC3.63□□□□□ -1.83
HIST1H3AP68431 AC009229.4-201ENST00000623854 1947 ntBASIC3.63□□□□□ -1.83
HIST1H3AP68431 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HIST1H3AP68431 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HIST1H3AP68431 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.63□□□□□ -1.83
HIST1H3AP68431 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
HIST1H3AP68431 AC083899.2-201ENST00000423285 1376 ntBASIC3.63□□□□□ -1.83
HIST1H3AP68431 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC134882.1-201ENST00000603738 1676 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 IGKV7-3-201ENST00000357453 298 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AL035696.2-201ENST00000407941 709 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 RNU4-25P-201ENST00000410569 230 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 RPL37P18-201ENST00000411602 243 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 DNAJC19P7-201ENST00000428811 344 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 GSTA7P-201ENST00000438425 448 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC092013.1-201ENST00000438795 332 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 RPSAP41-201ENST00000439695 860 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 VN1R96P-201ENST00000446052 858 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 IGKV2-38-201ENST00000517443 247 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 OR7E10P-201ENST00000526420 991 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC068714.1-201ENST00000559623 800 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC022655.2-201ENST00000577280 318 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC010680.3-201ENST00000604215 520 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 OR6R2P-201ENST00000609216 300 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 AC114781.5-201ENST00000615297 108 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 AP000843.1-201ENST00000624880 701 ntBASIC3.62□□□□□ -1.83
HIST1H3AP68431 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
HIST1H3AP68431 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HIST1H3AP68431 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC093311.1-201ENST00000506586 2021 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H3AP68431 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H3AP68431 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AL592437.2-201ENST00000421655 2434 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 RNU1-32P-201ENST00000363937 159 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 RPL23AP26-201ENST00000412728 464 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AMD1P2-201ENST00000412936 992 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 PGBD4P8-201ENST00000412993 562 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 JKAMPP1-201ENST00000413804 919 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC009480.2-201ENST00000422916 432 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 RPL23AP4-201ENST00000427757 463 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 MTCO1P54-201ENST00000430139 712 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 COX6B1P7-201ENST00000430845 235 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC006011.1-201ENST00000442758 349 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 S100A11P1-201ENST00000477525 312 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 METTL15P1-201ENST00000481421 1045 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AF213884.1-201ENST00000488102 463 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H3AP68431 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H3AP68431 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC018797.3-201ENST00000513388 1241 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HIST1H3AP68431 RNU7-143P-201ENST00000516781 65 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC092851.1-201ENST00000535964 478 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 CR383656.6-201ENST00000550518 394 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 TVP23BP1-201ENST00000557500 617 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC084757.1-201ENST00000559987 490 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.61□□□□□ -1.83
HIST1H3AP68431 MIR4277-201ENST00000578298 84 ntBASIC3.61□□□□□ -1.83
HIST1H3AP68431 AC006116.5-201ENST00000591936 559 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms