Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AP000843.1-201ENST00000624880 701 ntBASIC2.66□□□□□ -1.98
RPL39P62891 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.66□□□□□ -1.98
RPL39P62891 CASC19-222ENST00000641321 1173 ntBASIC2.66□□□□□ -1.98
RPL39P62891 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.66□□□□□ -1.98
RPL39P62891 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 CYP1D1P-201ENST00000416662 1433 ntBASIC2.66□□□□□ -1.98
RPL39P62891 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RPL39P62891 AC093311.1-201ENST00000506586 2021 ntBASIC2.66□□□□□ -1.98
RPL39P62891 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RPL39P62891 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.66□□□□□ -1.98
RPL39P62891 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RPL39P62891 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
RPL39P62891 AC093535.2-201ENST00000624769 2326 ntBASIC2.65□□□□□ -1.98
RPL39P62891 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RPL39P62891 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RPL39P62891 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RPL39P62891 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPL39P62891 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPL39P62891 RN7SKP103-201ENST00000363848 320 ntBASIC2.65□□□□□ -1.99
RPL39P62891 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
RPL39P62891 AMZ2P2-201ENST00000406819 1057 ntBASIC2.65□□□□□ -1.99
RPL39P62891 RPL23AP26-201ENST00000412728 464 ntBASIC2.65□□□□□ -1.99
RPL39P62891 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RPL39P62891 AC119751.6-201ENST00000416712 186 ntBASIC2.65□□□□□ -1.99
RPL39P62891 RPL23AP38-201ENST00000423801 469 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.65□□□□□ -1.99
RPL39P62891 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.65□□□□□ -1.99
RPL39P62891 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC2.65□□□□□ -1.99
RPL39P62891 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 snoU13.1-201ENST00000459157 104 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AC074386.1-201ENST00000476560 767 ntBASIC2.65□□□□□ -1.99
RPL39P62891 RN7SL177P-201ENST00000476596 299 ntBASIC2.65□□□□□ -1.99
RPL39P62891 NPM1P17-201ENST00000479221 602 ntBASIC2.65□□□□□ -1.99
RPL39P62891 UBA52P3-201ENST00000491303 382 ntBASIC2.65□□□□□ -1.99
RPL39P62891 RPS27AP13-201ENST00000498403 237 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 AC011411.1-201ENST00000509592 876 ntBASIC2.65□□□□□ -1.99
RPL39P62891 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC2.65□□□□□ -1.99
RPL39P62891 AC008802.1-201ENST00000519121 791 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.65□□□□□ -1.99
RPL39P62891 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPL39P62891 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 YPEL5P3-201ENST00000547227 352 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RPL39P62891 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.65□□□□□ -1.99
RPL39P62891 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 AC005191.1-201ENST00000603950 358 ntBASIC2.65□□□□□ -1.99
RPL39P62891 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 AC008121.2-201ENST00000614647 523 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AC010608.2-201ENST00000624830 470 ntBASIC2.65□□□□□ -1.99
RPL39P62891 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.65□□□□□ -1.99
RPL39P62891 PRO1804-201ENST00000623780 2050 ntBASIC2.65□□□□□ -1.99
RPL39P62891 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC2.65□□□□□ -1.99
RPL39P62891 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RPL39P62891 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC2.65□□□□□ -1.99
RPL39P62891 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.64□□□□□ -1.99
RPL39P62891 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RPL39P62891 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RPL39P62891 OR4K17-201ENST00000315543 1032 ntBASIC2.64□□□□□ -1.99
RPL39P62891 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RPL39P62891 RNU1-87P-201ENST00000363727 170 ntBASIC2.64□□□□□ -1.99
RPL39P62891 MIR105-2-201ENST00000385083 81 ntBASIC2.64□□□□□ -1.99
RPL39P62891 MIR199A2-201ENST00000385289 110 ntBASIC2.64□□□□□ -1.99
RPL39P62891 AL136116.1-201ENST00000403591 381 ntBASIC2.64□□□□□ -1.99
RPL39P62891 MIR1183-201ENST00000408856 89 ntBASIC2.64□□□□□ -1.99
RPL39P62891 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.64□□□□□ -1.99
RPL39P62891 RN7SKP285-201ENST00000410137 318 ntBASIC2.64□□□□□ -1.99
RPL39P62891 RN7SKP33-201ENST00000410942 340 ntBASIC2.64□□□□□ -1.99
RPL39P62891 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.64□□□□□ -1.99
RPL39P62891 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.64□□□□□ -1.99
RPL39P62891 AL691449.1-201ENST00000426570 421 ntBASIC2.64□□□□□ -1.99
RPL39P62891 NDUFB1P1-201ENST00000435191 180 ntBASIC2.64□□□□□ -1.99
RPL39P62891 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 AC006466.1-201ENST00000438721 289 ntBASIC2.64□□□□□ -1.99
RPL39P62891 SNORA71B-202ENST00000439232 272 ntBASIC2.64□□□□□ -1.99
RPL39P62891 ARAFP2-201ENST00000440565 559 ntBASIC2.64□□□□□ -1.99
RPL39P62891 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 AC011276.1-201ENST00000469688 323 ntBASIC2.64□□□□□ -1.99
RPL39P62891 RN7SL303P-201ENST00000469773 251 ntBASIC2.64□□□□□ -1.99
RPL39P62891 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.64□□□□□ -1.99
RPL39P62891 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.64□□□□□ -1.99
RPL39P62891 RPS4XP14-201ENST00000493072 781 ntBASIC2.64□□□□□ -1.99
RPL39P62891 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 AC108941.1-201ENST00000502853 530 ntBASIC2.64□□□□□ -1.99
RPL39P62891 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RPL39P62891 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 NDUFB9P3-201ENST00000521269 501 ntBASIC2.64□□□□□ -1.99
RPL39P62891 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC2.64□□□□□ -1.99
RPL39P62891 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms