Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.13□□□□□ -1.75
BRCA2P51587 VN1R25P-201ENST00000443385 738 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 AC006517.1-201ENST00000480485 328 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 AC090151.1-201ENST00000520784 730 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.13□□□□□ -1.75
BRCA2P51587 PCA3_2.1-201ENST00000612507 409 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 CCDC162P-202ENST00000368966 6751 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 AP003122.5-201ENST00000527668 3766 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.13□□□□□ -1.75
BRCA2P51587 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
BRCA2P51587 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.13□□□□□ -1.75
BRCA2P51587 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.13□□□□□ -1.75
BRCA2P51587 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
BRCA2P51587 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.13□□□□□ -1.75
BRCA2P51587 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRCA2P51587 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
BRCA2P51587 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCA2P51587 RNU6-729P-201ENST00000384399 107 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
BRCA2P51587 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCA2P51587 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 AL390838.2-201ENST00000602394 274 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 THAP12P5-201ENST00000405864 2275 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.12□□□□□ -1.75
BRCA2P51587 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 RPL23AP65-201ENST00000475608 468 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 AC084198.1-201ENST00000477747 402 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.12□□□□□ -1.75
BRCA2P51587 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 GSTA8P-201ENST00000404253 637 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCA2P51587 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.12□□□□□ -1.75
BRCA2P51587 RPS27AP15-201ENST00000447672 466 ntBASIC4.12□□□□□ -1.75
BRCA2P51587 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCA2P51587 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.12□□□□□ -1.75
BRCA2P51587 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BRCA2P51587 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRCA2P51587 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCA2P51587 RPL7P24-201ENST00000493052 752 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 AC006539.2-201ENST00000601729 572 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 AL132656.3-201ENST00000606384 1595 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 AL451142.2-201ENST00000429076 2090 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCA2P51587 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRCA2P51587 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.11□□□□□ -1.75
BRCA2P51587 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
BRCA2P51587 AC026784.1-201ENST00000507986 352 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCA2P51587 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCA2P51587 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCA2P51587 AC008966.2-201ENST00000606157 453 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 AL139089.1-201ENST00000620372 975 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
BRCA2P51587 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 AC024341.1-201ENST00000526444 1552 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
BRCA2P51587 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCA2P51587 AC093663.1-201ENST00000497190 394 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCA2P51587 RNA5SP164-201ENST00000516533 110 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCA2P51587 AC113192.3-201ENST00000529152 742 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 AL451007.1-201ENST00000595491 289 ntBASIC4.11□□□□□ -1.75
BRCA2P51587 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCA2P51587 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.1□□□□□ -1.75
BRCA2P51587 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCA2P51587 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.1□□□□□ -1.75
BRCA2P51587 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
BRCA2P51587 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.1□□□□□ -1.75
BRCA2P51587 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.1□□□□□ -1.75
BRCA2P51587 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCA2P51587 BTBD10P1-201ENST00000549824 1352 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms