Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA1P49639 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA1P49639 HMGB1P40-201ENST00000525121 540 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA1P49639 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA1P49639 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA1P49639 OSBPL9P5-201ENST00000542581 171 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC092747.2-201ENST00000545069 983 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC069240.1-201ENST00000548774 375 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 POLR2KP1-201ENST00000553226 168 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AL132657.2-201ENST00000564417 358 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA1P49639 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA1P49639 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA1P49639 AC008088.1-201ENST00000580993 280 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXA1P49639 AP001269.3-201ENST00000588718 329 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AP001542.2-201ENST00000593141 364 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA1P49639 AL162431.4-201ENST00000604674 411 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC020634.1-201ENST00000608701 549 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 uc_338.9-201ENST00000617424 182 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 AC015726.3-201ENST00000624501 418 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA1P49639 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA1P49639 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA1P49639 AC006210.2-201ENST00000367074 1545 ntBASIC4.19□□□□□ -1.74
HOXA1P49639 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HOXA1P49639 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA1P49639 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA1P49639 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA1P49639 PNPT1P2-201ENST00000456768 2050 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 IQCB2P-201ENST00000401788 1633 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 CASC19-284ENST00000642142 1868 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HOXA1P49639 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HOXA1P49639 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 OR1L1-202ENST00000373686 1083 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 RNU6-549P-201ENST00000384433 107 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 RNU6-83P-201ENST00000384568 112 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 MIR3074-201ENST00000384885 81 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 MIR525-201ENST00000384978 85 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 MIR93-201ENST00000385024 80 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 OR8V1P-201ENST00000395193 873 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 OR7E156P-201ENST00000400303 464 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 ERHP2-201ENST00000402323 299 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AL079342.2-201ENST00000403367 482 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 RNU6-575P-201ENST00000411326 105 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 HMGB1P49-201ENST00000418882 569 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA1P49639 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXA1P49639 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 RPS26P2-201ENST00000440331 348 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AL353748.1-201ENST00000440753 474 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AC009263.1-201ENST00000441193 1239 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 Z80107.2-201ENST00000445127 392 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 TPTE2P6-202ENST00000445572 1007 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXA1P49639 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA1P49639 AL122001.1-201ENST00000457027 370 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AC108161.1-201ENST00000461060 402 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 PRDX3P4-201ENST00000470828 747 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC006427.1-201ENST00000514359 712 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC007834.2-201ENST00000536310 343 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA1P49639 AC013444.2-201ENST00000603317 787 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AC018695.5-201ENST00000605872 315 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA1P49639 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA1P49639 AL592148.2-201ENST00000612210 372 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AC140113.4-201ENST00000622087 222 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AL157770.1-201ENST00000623049 439 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AP002782.1-201ENST00000623107 614 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AP000676.3-201ENST00000623299 569 ntBASIC4.18□□□□□ -1.74
HOXA1P49639 AC079416.3-201ENST00000624479 549 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms