Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NACA3P-201ENST00000359690 648 ntBASIC4.66□□□□□ -1.66
CENPAP49450 RNA5SP335-201ENST00000363817 110 ntBASIC4.66□□□□□ -1.66
CENPAP49450 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 RNU6-413P-201ENST00000384115 107 ntBASIC4.66□□□□□ -1.66
CENPAP49450 RNU1-149P-201ENST00000390870 161 ntBASIC4.66□□□□□ -1.66
CENPAP49450 RNA5SP178-201ENST00000410380 128 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.66□□□□□ -1.66
CENPAP49450 TRGV6-201ENST00000417928 299 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC073069.1-201ENST00000428657 441 ntBASIC4.66□□□□□ -1.66
CENPAP49450 COX6CP13-201ENST00000428703 226 ntBASIC4.66□□□□□ -1.66
CENPAP49450 RPS6P12-201ENST00000432491 726 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.66□□□□□ -1.66
CENPAP49450 RPS29P10-201ENST00000439197 166 ntBASIC4.66□□□□□ -1.66
CENPAP49450 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 YWHAQP9-201ENST00000445891 512 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC004980.3-201ENST00000447046 365 ntBASIC4.66□□□□□ -1.66
CENPAP49450 RPL7P31-201ENST00000450192 724 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC093166.2-201ENST00000455969 1017 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC091180.1-201ENST00000462104 372 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AL133445.1-201ENST00000467051 452 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AL161747.1-201ENST00000480068 358 ntBASIC4.66□□□□□ -1.66
CENPAP49450 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AC084024.2-201ENST00000503480 791 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 RNU6-416P-201ENST00000516265 103 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.66□□□□□ -1.66
CENPAP49450 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AC134698.5-201ENST00000519444 336 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.66□□□□□ -1.66
CENPAP49450 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.66□□□□□ -1.66
CENPAP49450 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 AC008536.1-201ENST00000602872 669 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC008814.1-201ENST00000603797 406 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC104695.2-201ENST00000605056 775 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.66□□□□□ -1.66
CENPAP49450 AL592148.2-201ENST00000612210 372 ntBASIC4.66□□□□□ -1.66
CENPAP49450 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 AC091304.6-201ENST00000619761 202 ntBASIC4.66□□□□□ -1.66
CENPAP49450 Z99129.2-201ENST00000619967 314 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC000123.2-201ENST00000623124 461 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC068057.2-201ENST00000624047 895 ntBASIC4.66□□□□□ -1.66
CENPAP49450 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.66□□□□□ -1.66
CENPAP49450 AC087821.2-201ENST00000637086 450 ntBASIC4.66□□□□□ -1.66
CENPAP49450 AC135068.12-201ENST00000637370 931 ntBASIC4.66□□□□□ -1.66
CENPAP49450 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 AC006042.3-201ENST00000454684 1469 ntBASIC4.66□□□□□ -1.66
CENPAP49450 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CENPAP49450 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CENPAP49450 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 AC046144.1-201ENST00000478559 1853 ntBASIC4.65□□□□□ -1.66
CENPAP49450 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.66
CENPAP49450 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 AC134882.1-201ENST00000603738 1676 ntBASIC4.65□□□□□ -1.66
CENPAP49450 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CENPAP49450 AC107068.1-201ENST00000563286 4218 ntBASIC4.65□□□□□ -1.66
CENPAP49450 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CENPAP49450 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CENPAP49450 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CENPAP49450 RNA5SP234-201ENST00000363916 119 ntBASIC4.65□□□□□ -1.67
CENPAP49450 OR1L1-202ENST00000373686 1083 ntBASIC4.65□□□□□ -1.67
CENPAP49450 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.65□□□□□ -1.67
CENPAP49450 MIR323B-201ENST00000385269 82 ntBASIC4.65□□□□□ -1.67
CENPAP49450 AL031985.1-201ENST00000392713 418 ntBASIC4.65□□□□□ -1.67
CENPAP49450 AL035079.1-201ENST00000405210 287 ntBASIC4.65□□□□□ -1.67
CENPAP49450 AL390316.1-201ENST00000406279 553 ntBASIC4.65□□□□□ -1.67
CENPAP49450 MIR1271-201ENST00000408537 86 ntBASIC4.65□□□□□ -1.67
CENPAP49450 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.65□□□□□ -1.67
CENPAP49450 RN7SKP59-201ENST00000410520 314 ntBASIC4.65□□□□□ -1.67
CENPAP49450 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.65□□□□□ -1.67
CENPAP49450 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.65□□□□□ -1.67
CENPAP49450 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.65□□□□□ -1.67
CENPAP49450 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.65□□□□□ -1.67
CENPAP49450 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.65□□□□□ -1.67
CENPAP49450 AC092809.1-201ENST00000441469 474 ntBASIC4.65□□□□□ -1.67
CENPAP49450 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.65□□□□□ -1.67
CENPAP49450 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.65□□□□□ -1.67
CENPAP49450 AL645939.1-201ENST00000453429 797 ntBASIC4.65□□□□□ -1.67
CENPAP49450 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CENPAP49450 RPL23AP71-201ENST00000470966 469 ntBASIC4.65□□□□□ -1.67
CENPAP49450 RN7SL547P-201ENST00000490793 290 ntBASIC4.65□□□□□ -1.67
CENPAP49450 AC073073.1-201ENST00000493920 463 ntBASIC4.65□□□□□ -1.67
CENPAP49450 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms