Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX1P48742 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LHX1P48742 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LHX1P48742 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 RNU6-1005P-201ENST00000384519 107 ntBASIC4.68□□□□□ -1.66
LHX1P48742 MIR1271-201ENST00000408537 86 ntBASIC4.68□□□□□ -1.66
LHX1P48742 SNORA74C-2-201ENST00000411179 201 ntBASIC4.68□□□□□ -1.66
LHX1P48742 RPS20P14-201ENST00000412545 360 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AL158825.1-201ENST00000414735 521 ntBASIC4.68□□□□□ -1.66
LHX1P48742 LINC01347-201ENST00000417964 355 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AL512637.2-201ENST00000431287 1256 ntBASIC4.68□□□□□ -1.66
LHX1P48742 RPL34P6-201ENST00000432390 345 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 ACTR3P2-201ENST00000439585 1257 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC097499.1-201ENST00000444277 208 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 RPL32P14-201ENST00000463196 378 ntBASIC4.68□□□□□ -1.66
LHX1P48742 RN7SL385P-201ENST00000468873 276 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.68□□□□□ -1.66
LHX1P48742 ATP1B1P1-201ENST00000509767 915 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 CYCSP28-201ENST00000534284 321 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 PSMB7P1-201ENST00000556349 514 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC090515.3-201ENST00000560431 315 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC104229.1-201ENST00000561364 255 ntBASIC4.68□□□□□ -1.66
LHX1P48742 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 MIR6798-201ENST00000612887 67 ntBASIC4.68□□□□□ -1.66
LHX1P48742 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
LHX1P48742 MLECP1-201ENST00000615893 709 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AC022106.2-201ENST00000620114 757 ntBASIC4.68□□□□□ -1.66
LHX1P48742 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.68□□□□□ -1.66
LHX1P48742 AP000943.4-201ENST00000622912 357 ntBASIC4.68□□□□□ -1.66
LHX1P48742 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 AC140479.6-201ENST00000633535 357 ntBASIC4.68□□□□□ -1.66
LHX1P48742 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LHX1P48742 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 AL136520.1-201ENST00000600311 1322 ntBASIC4.68□□□□□ -1.66
LHX1P48742 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LHX1P48742 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.68□□□□□ -1.66
LHX1P48742 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 AC027228.2-201ENST00000567141 2154 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AC093311.1-201ENST00000506586 2021 ntBASIC4.67□□□□□ -1.66
LHX1P48742 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 GCNT6-201ENST00000379591 934 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 CDY14P-201ENST00000431260 1014 ntBASIC4.67□□□□□ -1.66
LHX1P48742 CDY12P-201ENST00000440679 1015 ntBASIC4.67□□□□□ -1.66
LHX1P48742 CDY13P-201ENST00000445813 1015 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AC092685.1-201ENST00000447960 1243 ntBASIC4.67□□□□□ -1.66
LHX1P48742 CDY23P-201ENST00000451661 1014 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 SETP6-201ENST00000479329 568 ntBASIC4.67□□□□□ -1.66
LHX1P48742 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.67□□□□□ -1.66
LHX1P48742 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.67□□□□□ -1.66
LHX1P48742 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.67□□□□□ -1.66
LHX1P48742 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 C1DP5-201ENST00000525775 383 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LHX1P48742 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.67□□□□□ -1.66
LHX1P48742 AC026741.1-201ENST00000605892 482 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms