Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU1-83P-201ENST00000363426 164 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RNU4-92P-201ENST00000363783 136 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RNU6-619P-201ENST00000365146 108 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX2-1P43699 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AL031985.1-201ENST00000392713 418 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 RNA5SP178-201ENST00000410380 128 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RNU6-272P-201ENST00000411028 104 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 OR51B3P-201ENST00000412287 913 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 BTF3P8-201ENST00000414577 526 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 HIGD1AP15-201ENST00000416198 280 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 FABP7P1-201ENST00000424004 391 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 RPS29P14-201ENST00000431518 171 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RPL37P1-201ENST00000432310 284 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX2-1P43699 Z80107.2-201ENST00000445127 392 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC233982.1-201ENST00000451247 436 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RPS17P2-201ENST00000461663 408 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 NAP1L1P3-201ENST00000462291 880 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AL133445.1-201ENST00000467051 452 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC068587.2-201ENST00000478386 781 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 GAPDHP39-201ENST00000481866 979 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC004815.1-201ENST00000484185 331 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RPS27P23-201ENST00000487608 251 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 UBA52P3-201ENST00000491303 382 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC022790.1-201ENST00000522872 204 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC022404.1-201ENST00000555320 273 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 NIFKP8-201ENST00000560500 874 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.04□□□□□ -1.76
NKX2-1P43699 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC133552.5-201ENST00000604266 540 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC087783.2-201ENST00000605070 562 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC015982.1-201ENST00000608113 465 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AL356863.1-201ENST00000623378 1080 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 MTND4P8-201ENST00000514997 1362 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 DBF4P1-201ENST00000412976 1892 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC108751.5-201ENST00000492880 1336 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NKX2-1P43699 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 IL6STP1-201ENST00000346911 1020 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NKX2-1P43699 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
NKX2-1P43699 NUDT19P3-201ENST00000404698 555 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 MIR1182-201ENST00000408363 97 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC009237.10-201ENST00000414112 510 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 RPS24P7-201ENST00000416921 246 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC007394.1-201ENST00000421941 531 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-1P43699 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC022795.1-201ENST00000473808 480 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 RN7SL558P-201ENST00000497468 299 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC021146.5-201ENST00000503544 545 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms