Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CTNNA1P35221 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 SNORA51.1-201ENST00000363243 140 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 RNU6-1005P-201ENST00000384519 107 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 MIR124-3-201ENST00000384866 87 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 MIR708-201ENST00000390708 88 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 RNU6-796P-201ENST00000391086 107 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 Z98745.1-201ENST00000402553 494 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 HMGB3P31-201ENST00000413333 595 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 PRELID3BP11-201ENST00000414230 479 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 GTF3AP1-201ENST00000416942 1004 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 BX510359.2-201ENST00000417920 305 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 HMGB1P48-201ENST00000446155 598 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 RPS27AP15-201ENST00000447672 466 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC006967.1-201ENST00000467608 589 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AC018635.1-201ENST00000468292 1030 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 RPL7AP6-201ENST00000477943 801 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC008897.1-201ENST00000494006 347 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC008565.1-201ENST00000509046 885 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 PPBPP1-201ENST00000510807 373 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AC008694.2-201ENST00000517591 306 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA1P35221 SOX5P1-201ENST00000524155 1127 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 C1DP5-201ENST00000525775 383 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA1P35221 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA1P35221 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC113194.1-201ENST00000606037 500 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 AC024595.1-201ENST00000623088 387 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA1P35221 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNA1P35221 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CTNNA1P35221 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNA1P35221 AC017007.4-201ENST00000503353 1352 ntBASIC4.78□□□□□ -1.64
CTNNA1P35221 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CTNNA1P35221 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA1P35221 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA1P35221 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNA1P35221 RNU6-543P-201ENST00000362576 108 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA1P35221 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AL121834.1-202ENST00000404494 277 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 RNU4-34P-201ENST00000410431 124 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AL160275.2-201ENST00000412010 394 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA1P35221 RAD23BP1-201ENST00000421404 1227 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AC006455.6-201ENST00000426192 893 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC023141.6-201ENST00000429418 337 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AC005154.2-201ENST00000438110 379 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC016831.4-201ENST00000438302 307 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 ELOCP3-201ENST00000439303 348 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 CEACAMP7-201ENST00000444105 496 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA1P35221 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA1P35221 RPL37P6-202ENST00000464216 403 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC104689.1-201ENST00000473356 768 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC104763.1-201ENST00000475274 360 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 RPL7P16-201ENST00000479738 738 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA1P35221 AC007016.1-201ENST00000512110 244 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC133963.2-201ENST00000513686 578 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA1P35221 MYL12AP1-201ENST00000518490 515 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.77□□□□□ -1.65
CTNNA1P35221 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AC027104.1-201ENST00000563702 681 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 MIR3667-201ENST00000581025 74 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AL512782.1-201ENST00000603093 364 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AC083899.3-201ENST00000603413 594 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNA1P35221 AC105429.2-201ENST00000610567 517 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 MIR6862-1-201ENST00000613016 70 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 MIR6862-2-201ENST00000614755 70 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 U3.53-201ENST00000628922 216 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNA1P35221 EIF2AP4-201ENST00000424793 1781 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 ZNF33CP-201ENST00000432492 2030 ntBASIC4.77□□□□□ -1.65
CTNNA1P35221 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNA1P35221 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNA1P35221 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms