Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
CKS2P33552 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.91□□□□□ -1.94
CKS2P33552 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CKS2P33552 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CKS2P33552 MTCO1P14-201ENST00000441695 1559 ntBASIC2.91□□□□□ -1.94
CKS2P33552 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
CKS2P33552 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CKS2P33552 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CKS2P33552 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.9□□□□□ -1.94
CKS2P33552 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CKS2P33552 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.9□□□□□ -1.94
CKS2P33552 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CKS2P33552 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
CKS2P33552 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CKS2P33552 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CKS2P33552 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CKS2P33552 AC007685.1-201ENST00000329806 452 ntBASIC2.9□□□□□ -1.95
CKS2P33552 SNORD113.2-201ENST00000364166 89 ntBASIC2.9□□□□□ -1.95
CKS2P33552 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.9□□□□□ -1.95
CKS2P33552 MIR621-201ENST00000384919 96 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AL049697.2-201ENST00000403708 294 ntBASIC2.9□□□□□ -1.95
CKS2P33552 MIR1282-201ENST00000408865 101 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.9□□□□□ -1.95
CKS2P33552 RPL12P28-201ENST00000430852 489 ntBASIC2.9□□□□□ -1.95
CKS2P33552 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.9□□□□□ -1.95
CKS2P33552 USP9YP7-201ENST00000436723 430 ntBASIC2.9□□□□□ -1.95
CKS2P33552 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CKS2P33552 PHBP16-201ENST00000446318 950 ntBASIC2.9□□□□□ -1.95
CKS2P33552 USP9YP32-201ENST00000452432 430 ntBASIC2.9□□□□□ -1.95
CKS2P33552 NANOGP10-201ENST00000453325 895 ntBASIC2.9□□□□□ -1.95
CKS2P33552 RPL5P32-201ENST00000454085 879 ntBASIC2.9□□□□□ -1.95
CKS2P33552 RPS20P4-201ENST00000461659 355 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AC092691.2-201ENST00000461787 803 ntBASIC2.9□□□□□ -1.95
CKS2P33552 RPL7P1-201ENST00000468161 747 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AC092324.1-201ENST00000468671 324 ntBASIC2.9□□□□□ -1.95
CKS2P33552 RPL7P9-201ENST00000468715 747 ntBASIC2.9□□□□□ -1.95
CKS2P33552 KRTAP5-14P-201ENST00000502328 121 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.9□□□□□ -1.95
CKS2P33552 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.9□□□□□ -1.95
CKS2P33552 AC093824.1-201ENST00000508796 343 ntBASIC2.9□□□□□ -1.95
CKS2P33552 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC2.9□□□□□ -1.95
CKS2P33552 SNORA70.14-201ENST00000516205 110 ntBASIC2.9□□□□□ -1.95
CKS2P33552 RNU6-347P-201ENST00000516658 105 ntBASIC2.9□□□□□ -1.95
CKS2P33552 MTND1P6-201ENST00000523621 946 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AC105233.3-201ENST00000531125 744 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AC091515.1-201ENST00000548110 679 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.9□□□□□ -1.95
CKS2P33552 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.9□□□□□ -1.95
CKS2P33552 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.9□□□□□ -1.95
CKS2P33552 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC2.9□□□□□ -1.95
CKS2P33552 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
CKS2P33552 AC022655.2-201ENST00000577280 318 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.9□□□□□ -1.95
CKS2P33552 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.9□□□□□ -1.95
CKS2P33552 VN1R84P-201ENST00000593697 235 ntBASIC2.9□□□□□ -1.95
CKS2P33552 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.9□□□□□ -1.95
CKS2P33552 FAM27D1-201ENST00000612308 341 ntBASIC2.9□□□□□ -1.95
CKS2P33552 NAA60-237ENST00000615865 326 ntTSL 5 BASIC2.9□□□□□ -1.95
CKS2P33552 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC2.9□□□□□ -1.95
CKS2P33552 AC009452.1-201ENST00000640823 606 ntBASIC2.9□□□□□ -1.95
CKS2P33552 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CKS2P33552 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CKS2P33552 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.9□□□□□ -1.95
CKS2P33552 AC009229.4-201ENST00000623854 1947 ntBASIC2.89□□□□□ -1.95
CKS2P33552 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS2P33552 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS2P33552 AC132825.1-201ENST00000463573 2247 ntBASIC2.89□□□□□ -1.95
CKS2P33552 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CKS2P33552 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS2P33552 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS2P33552 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CKS2P33552 SNORA60-201ENST00000362396 134 ntBASIC2.89□□□□□ -1.95
CKS2P33552 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS2P33552 HYKK-202ENST00000408962 847 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS2P33552 AC098592.2-201ENST00000413158 265 ntBASIC2.89□□□□□ -1.95
CKS2P33552 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CKS2P33552 RPL30P2-201ENST00000414021 291 ntBASIC2.89□□□□□ -1.95
CKS2P33552 AC010740.1-201ENST00000417035 684 ntBASIC2.89□□□□□ -1.95
CKS2P33552 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.89□□□□□ -1.95
CKS2P33552 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.89□□□□□ -1.95
CKS2P33552 AC127526.1-201ENST00000417526 366 ntBASIC2.89□□□□□ -1.95
CKS2P33552 CHIAP3-201ENST00000423668 1133 ntBASIC2.89□□□□□ -1.95
CKS2P33552 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.89□□□□□ -1.95
CKS2P33552 AL358472.1-201ENST00000431295 329 ntBASIC2.89□□□□□ -1.95
CKS2P33552 BMS1P19-201ENST00000433925 393 ntBASIC2.89□□□□□ -1.95
CKS2P33552 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CKS2P33552 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC2.89□□□□□ -1.95
CKS2P33552 AC006011.1-201ENST00000442758 349 ntBASIC2.89□□□□□ -1.95
CKS2P33552 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.89□□□□□ -1.95
CKS2P33552 EIF4EBP2P1-201ENST00000450009 343 ntBASIC2.89□□□□□ -1.95
CKS2P33552 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS2P33552 RPL7P32-201ENST00000457119 744 ntBASIC2.89□□□□□ -1.95
CKS2P33552 EIF4A2P4-201ENST00000458691 1196 ntBASIC2.89□□□□□ -1.95
CKS2P33552 RPL12P20-201ENST00000475538 479 ntBASIC2.89□□□□□ -1.95
CKS2P33552 RN7SL826P-201ENST00000479724 288 ntBASIC2.89□□□□□ -1.95
CKS2P33552 RPL7P24-201ENST00000493052 752 ntBASIC2.89□□□□□ -1.95
CKS2P33552 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC2.89□□□□□ -1.95
CKS2P33552 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CKS2P33552 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC2.89□□□□□ -1.95
CKS2P33552 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms