Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP1P30622 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.24□□□□□ -1.41
CLIP1P30622 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.24□□□□□ -1.41
CLIP1P30622 AC012314.7-201ENST00000619693 93 ntBASIC6.24□□□□□ -1.41
CLIP1P30622 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.24□□□□□ -1.41
CLIP1P30622 AC009093.8-201ENST00000641769 292 ntBASIC6.24□□□□□ -1.41
CLIP1P30622 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
CLIP1P30622 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.23□□□□□ -1.41
CLIP1P30622 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP1P30622 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP1P30622 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.23□□□□□ -1.41
CLIP1P30622 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP1P30622 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP1P30622 SNORA5A-201ENST00000384111 134 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.23□□□□□ -1.41
CLIP1P30622 RPL12P18-201ENST00000437175 325 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 HMGB1P37-201ENST00000439613 609 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 RANP8-201ENST00000444720 713 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 AC096553.1-201ENST00000605169 829 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 AC084757.4-201ENST00000616350 526 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 AC015908.5-201ENST00000623289 343 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 AC067931.1-201ENST00000624190 671 ntBASIC6.23□□□□□ -1.41
CLIP1P30622 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLIP1P30622 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP1P30622 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP1P30622 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLIP1P30622 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.22□□□□□ -1.41
CLIP1P30622 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.22□□□□□ -1.41
CLIP1P30622 MIR30B-201ENST00000384850 88 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 MIR7-3-201ENST00000384898 110 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 RPL7AP73-201ENST00000413490 353 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 AC091286.1-201ENST00000431233 461 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 AC011742.1-201ENST00000431448 434 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 AC093853.1-201ENST00000515689 483 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.22□□□□□ -1.41
CLIP1P30622 AC084759.1-201ENST00000561168 290 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 AC005344.1-201ENST00000613391 459 ntBASIC6.22□□□□□ -1.41
CLIP1P30622 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.22□□□□□ -1.41
CLIP1P30622 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
CLIP1P30622 RNA5SP52-201ENST00000362448 134 ntBASIC6.21□□□□□ -1.42
CLIP1P30622 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP1P30622 AC007066.1-201ENST00000392902 381 ntBASIC6.21□□□□□ -1.42
CLIP1P30622 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.21□□□□□ -1.42
CLIP1P30622 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.21□□□□□ -1.42
CLIP1P30622 UBTFL9-201ENST00000534504 1148 ntBASIC6.21□□□□□ -1.42
CLIP1P30622 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.21□□□□□ -1.42
CLIP1P30622 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.21□□□□□ -1.42
CLIP1P30622 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP1P30622 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.21□□□□□ -1.42
CLIP1P30622 ZNF285B-201ENST00000561698 1767 ntBASIC6.21□□□□□ -1.42
CLIP1P30622 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
CLIP1P30622 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP1P30622 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP1P30622 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CLIP1P30622 OR51C1P-202ENST00000641159 1444 ntBASIC6.2□□□□□ -1.42
CLIP1P30622 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP1P30622 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.2□□□□□ -1.42
CLIP1P30622 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
CLIP1P30622 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.2□□□□□ -1.42
CLIP1P30622 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.2□□□□□ -1.42
CLIP1P30622 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.2□□□□□ -1.42
CLIP1P30622 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.2□□□□□ -1.42
CLIP1P30622 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC6.2□□□□□ -1.42
CLIP1P30622 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP1P30622 AP000619.3-201ENST00000535634 1127 ntBASIC6.2□□□□□ -1.42
CLIP1P30622 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.2□□□□□ -1.42
CLIP1P30622 GNRHR2P1-201ENST00000555315 631 ntBASIC6.2□□□□□ -1.42
CLIP1P30622 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP1P30622 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP1P30622 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP1P30622 AC011266.1-201ENST00000624119 3569 ntBASIC6.2□□□□□ -1.42
CLIP1P30622 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLIP1P30622 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.19□□□□□ -1.42
CLIP1P30622 RNA5SP97-201ENST00000365006 84 ntBASIC6.19□□□□□ -1.42
CLIP1P30622 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.19□□□□□ -1.42
CLIP1P30622 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.19□□□□□ -1.42
CLIP1P30622 CYCSP43-201ENST00000438233 310 ntBASIC6.19□□□□□ -1.42
CLIP1P30622 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.19□□□□□ -1.42
CLIP1P30622 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.19□□□□□ -1.42
CLIP1P30622 AC006499.5-201ENST00000505037 514 ntBASIC6.19□□□□□ -1.42
CLIP1P30622 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.19□□□□□ -1.42
CLIP1P30622 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP1P30622 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP1P30622 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLIP1P30622 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
CLIP1P30622 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.18□□□□□ -1.42
CLIP1P30622 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 SOD2P1-201ENST00000396543 562 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 AL139247.1-201ENST00000422768 325 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 VN1R25P-201ENST00000443385 738 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.18□□□□□ -1.42
CLIP1P30622 VN1R40P-201ENST00000455196 941 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 RPL21P6-201ENST00000479171 504 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.18□□□□□ -1.42
CLIP1P30622 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP1P30622 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP1P30622 IGKV2D-19-201ENST00000523346 262 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms