Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC013262.1-201ENST00000426710 252 ntBASIC4.09□□□□□ -1.75
SHC1P29353 RPS12P10-201ENST00000427031 377 ntBASIC4.09□□□□□ -1.75
SHC1P29353 HMGB3P5-201ENST00000428894 612 ntBASIC4.09□□□□□ -1.75
SHC1P29353 RPL23AP1-201ENST00000428990 471 ntBASIC4.09□□□□□ -1.75
SHC1P29353 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 FTH1P16-201ENST00000435241 552 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AL450263.2-201ENST00000439400 589 ntBASIC4.09□□□□□ -1.75
SHC1P29353 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.09□□□□□ -1.75
SHC1P29353 CEACAMP9-201ENST00000442990 513 ntBASIC4.09□□□□□ -1.75
SHC1P29353 RPS27AP15-201ENST00000447672 466 ntBASIC4.09□□□□□ -1.75
SHC1P29353 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.09□□□□□ -1.75
SHC1P29353 AC022431.1-201ENST00000450941 438 ntBASIC4.09□□□□□ -1.75
SHC1P29353 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.09□□□□□ -1.75
SHC1P29353 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.09□□□□□ -1.75
SHC1P29353 RPS26P28-201ENST00000470806 348 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC037198.2-201ENST00000478845 733 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC090013.1-201ENST00000485147 480 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.09□□□□□ -1.75
SHC1P29353 AC113430.1-201ENST00000506872 718 ntBASIC4.09□□□□□ -1.75
SHC1P29353 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SHC1P29353 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.09□□□□□ -1.75
SHC1P29353 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 AP003066.2-201ENST00000529375 555 ntBASIC4.09□□□□□ -1.75
SHC1P29353 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SHC1P29353 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHC1P29353 NOP56P3-201ENST00000549457 385 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.09□□□□□ -1.75
SHC1P29353 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 AL121834.1-201ENST00000572284 509 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.09□□□□□ -1.75
SHC1P29353 AC069061.3-201ENST00000582254 823 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.09□□□□□ -1.75
SHC1P29353 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.09□□□□□ -1.75
SHC1P29353 HMGB2P1-201ENST00000591146 634 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.09□□□□□ -1.75
SHC1P29353 RPL12P25-202ENST00000598100 674 ntBASIC4.09□□□□□ -1.75
SHC1P29353 RPL26P30-202ENST00000602923 645 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.09□□□□□ -1.75
SHC1P29353 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.09□□□□□ -1.75
SHC1P29353 AC020634.1-201ENST00000608701 549 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.09□□□□□ -1.75
SHC1P29353 AC084824.4-201ENST00000620106 731 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AL078595.3-201ENST00000623815 1166 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.09□□□□□ -1.75
SHC1P29353 AC013437.2-201ENST00000639587 677 ntBASIC4.09□□□□□ -1.75
SHC1P29353 AL133243.3-201ENST00000617415 3004 ntBASIC4.09□□□□□ -1.75
SHC1P29353 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHC1P29353 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHC1P29353 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHC1P29353 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHC1P29353 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHC1P29353 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHC1P29353 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHC1P29353 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHC1P29353 RN7SKP216-201ENST00000411050 312 ntBASIC4.08□□□□□ -1.76
SHC1P29353 GSTM3P2-201ENST00000412746 530 ntBASIC4.08□□□□□ -1.76
SHC1P29353 SSR1P2-201ENST00000415208 787 ntBASIC4.08□□□□□ -1.76
SHC1P29353 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 CENPIP1-201ENST00000425713 902 ntBASIC4.08□□□□□ -1.76
SHC1P29353 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.08□□□□□ -1.76
SHC1P29353 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 RNFT1P2-201ENST00000443064 757 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AL096829.2-201ENST00000446582 742 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 AL139824.2-201ENST00000458731 1095 ntBASIC4.08□□□□□ -1.76
SHC1P29353 RPL32P14-201ENST00000463196 378 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC104164.3-201ENST00000467363 1258 ntBASIC4.08□□□□□ -1.76
SHC1P29353 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.08□□□□□ -1.76
SHC1P29353 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.08□□□□□ -1.76
SHC1P29353 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 RN7SKP92-201ENST00000517266 244 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC090151.1-201ENST00000520784 730 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 OR7E13P-201ENST00000526052 910 ntBASIC4.08□□□□□ -1.76
SHC1P29353 CR383656.6-201ENST00000550518 394 ntBASIC4.08□□□□□ -1.76
SHC1P29353 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.08□□□□□ -1.76
SHC1P29353 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 AC084783.1-201ENST00000565846 910 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.08□□□□□ -1.76
SHC1P29353 AC091178.1-203ENST00000584586 279 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.08□□□□□ -1.76
SHC1P29353 AC008759.1-201ENST00000589783 983 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC124856.1-201ENST00000600819 896 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC090181.2-201ENST00000602975 672 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC104785.1-201ENST00000603220 588 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC008782.1-201ENST00000603386 430 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AL592148.3-201ENST00000608771 2646 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AL133243.1-201ENST00000614487 366 ntBASIC4.08□□□□□ -1.76
SHC1P29353 LINC00901.1-201ENST00000617252 152 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC007275.1-201ENST00000621243 671 ntBASIC4.08□□□□□ -1.76
SHC1P29353 AC105105.5-201ENST00000622635 1294 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms