Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 AL109741.3-201ENST00000561748 592 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 MIR4458-201ENST00000578872 75 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 ADAD1P2-201ENST00000588476 646 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN6P29350 BPIFA4P-203ENST00000603168 689 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AC010857.1-201ENST00000606398 594 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPN6P29350 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN6P29350 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 USP9YP4-201ENST00000424401 1745 ntBASIC4.29□□□□□ -1.72
PTPN6P29350 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN6P29350 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PTPN6P29350 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN6P29350 LINC00622-201ENST00000562811 1570 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN6P29350 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN6P29350 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN6P29350 RNU6-398P-201ENST00000384143 109 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 TAF9BP2-201ENST00000400856 499 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 RPS24P12-201ENST00000402084 394 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AL590290.1-201ENST00000405336 380 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 FCF1P5-201ENST00000406490 482 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN6P29350 UBE2V1P15-201ENST00000407776 448 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 RN7SKP106-201ENST00000410832 272 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC010385.1-201ENST00000412374 256 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC119751.6-201ENST00000416712 186 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 CYCSP10-201ENST00000417973 294 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN6P29350 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC011753.3-201ENST00000443436 406 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC012158.1-204ENST00000483430 465 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN6P29350 AC134698.5-201ENST00000519444 336 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN6P29350 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 AL161713.1-201ENST00000555538 145 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN6P29350 LINC00557-201ENST00000563184 1279 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC106785.3-201ENST00000564064 847 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN6P29350 ELOCP28-201ENST00000590044 317 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC234771.5-201ENST00000600161 514 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC103792.1-201ENST00000603591 919 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC093765.1-201ENST00000603758 881 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN6P29350 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN6P29350 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN6P29350 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN6P29350 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTPN6P29350 CPHL1P-201ENST00000461341 3407 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 AL136964.1-201ENST00000622038 2990 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN6P29350 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN6P29350 AC092162.3-201ENST00000624511 1624 ntBASIC4.28□□□□□ -1.72
PTPN6P29350 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
PTPN6P29350 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN6P29350 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
PTPN6P29350 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AC021146.4-201ENST00000309229 279 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 IGKV7-3-201ENST00000357453 298 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 RNU1-108P-201ENST00000362556 161 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 RNA5SP505-201ENST00000364748 108 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 Z98745.1-201ENST00000402553 494 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AL049697.2-201ENST00000403708 294 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AL353692.2-201ENST00000407054 335 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AC016397.1-201ENST00000412463 242 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 UBTFL3-201ENST00000418934 1024 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AC062016.2-201ENST00000420950 676 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms