Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 GLRXP2-201ENST00000555594 321 ntBASIC3.77□□□□□ -1.81
USF1P22415 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.77□□□□□ -1.81
USF1P22415 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.77□□□□□ -1.81
USF1P22415 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.77□□□□□ -1.81
USF1P22415 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.77□□□□□ -1.81
USF1P22415 AP001160.4-201ENST00000596971 382 ntBASIC3.77□□□□□ -1.81
USF1P22415 AP004372.1-201ENST00000604842 844 ntBASIC3.77□□□□□ -1.81
USF1P22415 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.77□□□□□ -1.81
USF1P22415 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.77□□□□□ -1.81
USF1P22415 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.77□□□□□ -1.81
USF1P22415 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USF1P22415 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
USF1P22415 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USF1P22415 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF1P22415 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF1P22415 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF1P22415 CYP1D1P-201ENST00000416662 1433 ntBASIC3.77□□□□□ -1.81
USF1P22415 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USF1P22415 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF1P22415 AL355852.1-201ENST00000454081 1771 ntBASIC3.76□□□□□ -1.81
USF1P22415 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.76□□□□□ -1.81
USF1P22415 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.76□□□□□ -1.81
USF1P22415 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 OR5P1P-201ENST00000299512 925 ntBASIC3.76□□□□□ -1.81
USF1P22415 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
USF1P22415 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 RNU1-64P-201ENST00000365443 163 ntBASIC3.76□□□□□ -1.81
USF1P22415 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 GCNT6-201ENST00000379591 934 ntBASIC3.76□□□□□ -1.81
USF1P22415 RPL26P37-201ENST00000411983 438 ntBASIC3.76□□□□□ -1.81
USF1P22415 TRGV6-201ENST00000417928 299 ntBASIC3.76□□□□□ -1.81
USF1P22415 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.76□□□□□ -1.81
USF1P22415 RAD23BP1-201ENST00000421404 1227 ntBASIC3.76□□□□□ -1.81
USF1P22415 Z74021.1-201ENST00000423610 407 ntBASIC3.76□□□□□ -1.81
USF1P22415 AP001324.1-201ENST00000428553 399 ntBASIC3.76□□□□□ -1.81
USF1P22415 RPS3AP54-201ENST00000435535 734 ntBASIC3.76□□□□□ -1.81
USF1P22415 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.76□□□□□ -1.81
USF1P22415 Z99127.2-201ENST00000441426 334 ntBASIC3.76□□□□□ -1.81
USF1P22415 RPL7P33-201ENST00000444159 742 ntBASIC3.76□□□□□ -1.81
USF1P22415 AL157827.1-201ENST00000447622 132 ntBASIC3.76□□□□□ -1.81
USF1P22415 AL935212.3-201ENST00000450729 284 ntBASIC3.76□□□□□ -1.81
USF1P22415 RPL7P19-201ENST00000469948 618 ntBASIC3.76□□□□□ -1.81
USF1P22415 AC005912.1-201ENST00000495392 255 ntBASIC3.76□□□□□ -1.81
USF1P22415 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.76□□□□□ -1.81
USF1P22415 VWA8P1-201ENST00000510889 176 ntBASIC3.76□□□□□ -1.81
USF1P22415 OR8G5-201ENST00000524943 1041 ntBASIC3.76□□□□□ -1.81
USF1P22415 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.76□□□□□ -1.81
USF1P22415 CYCSP29-201ENST00000533731 318 ntBASIC3.76□□□□□ -1.81
USF1P22415 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.76□□□□□ -1.81
USF1P22415 AC068446.3-201ENST00000555285 382 ntBASIC3.76□□□□□ -1.81
USF1P22415 AC015912.2-201ENST00000571053 181 ntBASIC3.76□□□□□ -1.81
USF1P22415 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 AC067959.1-201ENST00000604334 379 ntBASIC3.76□□□□□ -1.81
USF1P22415 AL109618.2-201ENST00000605527 211 ntBASIC3.76□□□□□ -1.81
USF1P22415 BNIP3P7-201ENST00000605641 516 ntBASIC3.76□□□□□ -1.81
USF1P22415 AC008966.2-201ENST00000606157 453 ntBASIC3.76□□□□□ -1.81
USF1P22415 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 AC245389.2-201ENST00000616023 576 ntBASIC3.76□□□□□ -1.81
USF1P22415 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 AC242843.1-201ENST00000618702 573 ntBASIC3.76□□□□□ -1.81
USF1P22415 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 AC067852.7-201ENST00000623270 535 ntBASIC3.76□□□□□ -1.81
USF1P22415 AP003497.2-201ENST00000624220 967 ntBASIC3.76□□□□□ -1.81
USF1P22415 MIR3653-201ENST00000625572 110 ntBASIC3.76□□□□□ -1.81
USF1P22415 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.76□□□□□ -1.81
USF1P22415 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
USF1P22415 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 AC005261.4-201ENST00000600047 1385 ntBASIC3.76□□□□□ -1.81
USF1P22415 EOGT-210ENST00000615922 1931 ntBASIC3.76□□□□□ -1.81
USF1P22415 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USF1P22415 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
USF1P22415 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.76□□□□□ -1.81
USF1P22415 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 AC114546.3-201ENST00000623582 1734 ntBASIC3.75□□□□□ -1.81
USF1P22415 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 AP001002.1-201ENST00000625148 1513 ntBASIC3.75□□□□□ -1.81
USF1P22415 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.75□□□□□ -1.81
USF1P22415 KPNA2P2-201ENST00000419546 1489 ntBASIC3.75□□□□□ -1.81
USF1P22415 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.75□□□□□ -1.81
USF1P22415 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.75□□□□□ -1.81
USF1P22415 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 AL121657.1-201ENST00000327215 531 ntBASIC3.75□□□□□ -1.81
USF1P22415 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
USF1P22415 RNA5SP366-201ENST00000365454 123 ntBASIC3.75□□□□□ -1.81
USF1P22415 MIR7-1-201ENST00000384871 110 ntBASIC3.75□□□□□ -1.81
USF1P22415 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.75□□□□□ -1.81
USF1P22415 RPL23AP38-201ENST00000423801 469 ntBASIC3.75□□□□□ -1.81
USF1P22415 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.75□□□□□ -1.81
USF1P22415 MTCYBP12-201ENST00000440559 1134 ntBASIC3.75□□□□□ -1.81
USF1P22415 NDUFS5P3-201ENST00000450668 321 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms