Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ZNF807-201ENST00000328088 1707 ntBASIC3.94□□□□□ -1.78
VCANP13611 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
VCANP13611 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VCANP13611 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 GSTA8P-201ENST00000404253 637 ntBASIC3.94□□□□□ -1.78
VCANP13611 AC003685.2-201ENST00000422795 395 ntBASIC3.94□□□□□ -1.78
VCANP13611 AL513124.1-201ENST00000450410 614 ntBASIC3.94□□□□□ -1.78
VCANP13611 SNORD105B-201ENST00000458770 79 ntBASIC3.94□□□□□ -1.78
VCANP13611 AC133552.5-201ENST00000604266 540 ntBASIC3.94□□□□□ -1.78
VCANP13611 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.94□□□□□ -1.78
VCANP13611 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 AC007823.1-201ENST00000569932 1566 ntBASIC3.94□□□□□ -1.78
VCANP13611 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.94□□□□□ -1.78
VCANP13611 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 RPL7P60-201ENST00000397636 735 ntBASIC3.93□□□□□ -1.78
VCANP13611 AL592291.1-201ENST00000403830 352 ntBASIC3.93□□□□□ -1.78
VCANP13611 SNORA71B-202ENST00000439232 272 ntBASIC3.93□□□□□ -1.78
VCANP13611 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.93□□□□□ -1.78
VCANP13611 RNA5SP446-201ENST00000515955 82 ntBASIC3.93□□□□□ -1.78
VCANP13611 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.93□□□□□ -1.78
VCANP13611 UBE2NP1-201ENST00000545592 458 ntBASIC3.93□□□□□ -1.78
VCANP13611 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VCANP13611 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.93□□□□□ -1.78
VCANP13611 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 AC087241.4-201ENST00000612441 480 ntBASIC3.93□□□□□ -1.78
VCANP13611 BMS1P21-201ENST00000634565 365 ntBASIC3.93□□□□□ -1.78
VCANP13611 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 AL021877.2-201ENST00000624442 10684 ntBASIC3.93□□□□□ -1.78
VCANP13611 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VCANP13611 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 AC024341.1-201ENST00000526444 1552 ntBASIC3.93□□□□□ -1.78
VCANP13611 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC3.93□□□□□ -1.78
VCANP13611 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VCANP13611 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
VCANP13611 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VCANP13611 RPL36AP13-201ENST00000457490 317 ntBASIC3.93□□□□□ -1.78
VCANP13611 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.93□□□□□ -1.78
VCANP13611 AC011755.1-201ENST00000623763 2049 ntBASIC3.92□□□□□ -1.78
VCANP13611 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VCANP13611 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
VCANP13611 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 OR56B2P-201ENST00000317102 954 ntBASIC3.92□□□□□ -1.78
VCANP13611 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.92□□□□□ -1.78
VCANP13611 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.92□□□□□ -1.78
VCANP13611 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VCANP13611 AL352979.3-201ENST00000553515 247 ntBASIC3.92□□□□□ -1.78
VCANP13611 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.92□□□□□ -1.78
VCANP13611 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VCANP13611 AC073508.1-201ENST00000428866 656 ntBASIC3.92□□□□□ -1.78
VCANP13611 RN7SL432P-201ENST00000484057 298 ntBASIC3.92□□□□□ -1.78
VCANP13611 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.92□□□□□ -1.78
VCANP13611 NRBF2P5-201ENST00000603087 788 ntBASIC3.92□□□□□ -1.78
VCANP13611 QTRT1P1-201ENST00000604344 1078 ntBASIC3.92□□□□□ -1.78
VCANP13611 AC093732.2-201ENST00000607950 274 ntBASIC3.92□□□□□ -1.78
VCANP13611 AL392088.2-201ENST00000637607 285 ntBASIC3.92□□□□□ -1.78
VCANP13611 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VCANP13611 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.92□□□□□ -1.78
VCANP13611 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.92□□□□□ -1.78
VCANP13611 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.91□□□□□ -1.78
VCANP13611 MIR1179-201ENST00000408703 91 ntBASIC3.91□□□□□ -1.78
VCANP13611 BX842559.1-201ENST00000419615 532 ntBASIC3.91□□□□□ -1.78
VCANP13611 AC091862.1-201ENST00000438016 1100 ntBASIC3.91□□□□□ -1.78
VCANP13611 AC103783.1-201ENST00000520506 373 ntBASIC3.91□□□□□ -1.78
VCANP13611 AL121603.1-201ENST00000553815 142 ntBASIC3.91□□□□□ -1.78
VCANP13611 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.91□□□□□ -1.78
VCANP13611 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCANP13611 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCANP13611 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VCANP13611 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCANP13611 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCANP13611 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCANP13611 BX323014.1-201ENST00000412876 237 ntBASIC3.91□□□□□ -1.78
VCANP13611 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.91□□□□□ -1.78
VCANP13611 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.91□□□□□ -1.78
VCANP13611 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.91□□□□□ -1.78
VCANP13611 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCANP13611 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
VCANP13611 CCAT2-201ENST00000630920 1752 ntBASIC3.91□□□□□ -1.78
VCANP13611 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC3.91□□□□□ -1.78
VCANP13611 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms