Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RARAP10276 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RARAP10276 AC015799.1-201ENST00000622996 3122 ntBASIC6.54□□□□□ -1.36
RARAP10276 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RARAP10276 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.54□□□□□ -1.36
RARAP10276 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RARAP10276 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RARAP10276 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.53□□□□□ -1.36
RARAP10276 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 AC007996.1-201ENST00000620414 2821 ntBASIC6.53□□□□□ -1.36
RARAP10276 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 SNRPEP3-201ENST00000338402 276 ntBASIC6.53□□□□□ -1.36
RARAP10276 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 Y_RNA.67-201ENST00000362870 100 ntBASIC6.53□□□□□ -1.36
RARAP10276 RNU6-777P-201ENST00000364265 104 ntBASIC6.53□□□□□ -1.36
RARAP10276 RNU6-282P-201ENST00000365357 103 ntBASIC6.53□□□□□ -1.36
RARAP10276 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 AL121835.1-201ENST00000404250 354 ntBASIC6.53□□□□□ -1.36
RARAP10276 SNORA11B-201ENST00000408175 129 ntBASIC6.53□□□□□ -1.36
RARAP10276 RN7SKP151-201ENST00000410230 316 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC073264.1-201ENST00000411508 416 ntBASIC6.53□□□□□ -1.36
RARAP10276 RAB28P1-201ENST00000411517 641 ntBASIC6.53□□□□□ -1.36
RARAP10276 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 AC013429.2-201ENST00000418798 781 ntBASIC6.53□□□□□ -1.36
RARAP10276 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.53□□□□□ -1.36
RARAP10276 GAPDHP19-201ENST00000431768 1005 ntBASIC6.53□□□□□ -1.36
RARAP10276 AL365400.1-201ENST00000431854 640 ntBASIC6.53□□□□□ -1.36
RARAP10276 CXCR2P1-202ENST00000443392 1074 ntBASIC6.53□□□□□ -1.36
RARAP10276 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 HMGN1P36-201ENST00000446623 298 ntBASIC6.53□□□□□ -1.36
RARAP10276 MORF4-201ENST00000447135 971 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 RPL12P31-201ENST00000478433 450 ntBASIC6.53□□□□□ -1.36
RARAP10276 AL035690.1-201ENST00000490892 383 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC093815.1-201ENST00000508637 280 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 RNU6-445P-201ENST00000516949 107 ntBASIC6.53□□□□□ -1.36
RARAP10276 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.53□□□□□ -1.36
RARAP10276 NANOGNBP2-201ENST00000544753 553 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.53□□□□□ -1.36
RARAP10276 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 SNORD39.2-201ENST00000579995 76 ntBASIC6.53□□□□□ -1.36
RARAP10276 RN7SL66P-201ENST00000582099 264 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 AC063977.7-201ENST00000594454 337 ntBASIC6.53□□□□□ -1.36
RARAP10276 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
RARAP10276 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.53□□□□□ -1.36
RARAP10276 AC116312.1-201ENST00000606841 314 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 AL451049.1-201ENST00000608672 497 ntBASIC6.53□□□□□ -1.36
RARAP10276 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.53□□□□□ -1.36
RARAP10276 AC010205.1-201ENST00000616668 449 ntBASIC6.53□□□□□ -1.36
RARAP10276 AL031658.2-201ENST00000616850 651 ntBASIC6.53□□□□□ -1.36
RARAP10276 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.53□□□□□ -1.36
RARAP10276 MIR1302-1-201ENST00000637932 143 ntBASIC6.53□□□□□ -1.36
RARAP10276 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RARAP10276 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 AP000432.2-201ENST00000624164 2048 ntBASIC6.53□□□□□ -1.36
RARAP10276 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
RARAP10276 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 MSL3P1-202ENST00000440028 1468 ntBASIC6.53□□□□□ -1.36
RARAP10276 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RARAP10276 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RARAP10276 AC087516.1-201ENST00000561236 2428 ntBASIC6.52□□□□□ -1.36
RARAP10276 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.52□□□□□ -1.36
RARAP10276 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RARAP10276 SAMMSON-210ENST00000641260 1308 ntBASIC6.52□□□□□ -1.37
RARAP10276 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RARAP10276 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RARAP10276 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
RARAP10276 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RARAP10276 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.52□□□□□ -1.37
RARAP10276 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
RARAP10276 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RARAP10276 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.52□□□□□ -1.37
RARAP10276 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.52□□□□□ -1.37
RARAP10276 Y_RNA.157-201ENST00000363638 102 ntBASIC6.52□□□□□ -1.37
RARAP10276 Y_RNA.159-201ENST00000363674 87 ntBASIC6.52□□□□□ -1.37
RARAP10276 RNA5SP485-201ENST00000365053 119 ntBASIC6.52□□□□□ -1.37
RARAP10276 RNU6-738P-201ENST00000384531 106 ntBASIC6.52□□□□□ -1.37
RARAP10276 AL157702.1-201ENST00000398764 426 ntBASIC6.52□□□□□ -1.37
RARAP10276 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.52□□□□□ -1.37
RARAP10276 RN7SKP108-201ENST00000411367 328 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms