Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 FRG1KP-201ENST00000623592 341 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 AL031651.1-201ENST00000615357 1438 ntBASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.69□□□□□ -1.18
CSB-PGBD3P0DP91 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AL391261.1-201ENST00000555712 1479 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC011447.7-201ENST00000624228 1590 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 MAPK10-323ENST00000641493 3207 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 RPS26P38-201ENST00000414476 348 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 RPL23AP27-201ENST00000415161 451 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 MTND1P28-201ENST00000435623 950 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 RPL12P3-201ENST00000440080 396 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 MTND4P19-201ENST00000446659 478 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 COX6CP12-201ENST00000446748 202 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AL645937.3-201ENST00000453647 936 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC079841.1-201ENST00000481228 950 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC004453.1-201ENST00000487895 408 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 RPL15P21-201ENST00000495592 567 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AL358832.1-201ENST00000497800 389 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC090638.1-201ENST00000498296 909 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 RN7SKP298-201ENST00000515950 94 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AL390726.5-202ENST00000564800 256 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC090751.1-201ENST00000566966 267 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 MIR6748-201ENST00000610433 71 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 MIR7844-201ENST00000616161 122 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 U1.31-201ENST00000620022 160 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 ATE1-AS1-202ENST00000636460 506 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 TEX21P-201ENST00000447107 1476 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 AC068870.3-201ENST00000625077 2536 ntBASIC7.68□□□□□ -1.18
CSB-PGBD3P0DP91 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 Y_RNA.162-201ENST00000363683 102 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 GAPDHP42-201ENST00000406848 981 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 RPL23AP47-201ENST00000408017 460 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 PIGPP2-201ENST00000411569 458 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AC092427.1-201ENST00000439177 601 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 GDI2P2-201ENST00000445131 608 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 OR6C5P-201ENST00000452388 923 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 Y_RNA.701-201ENST00000516812 110 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 RNA5SP135-201ENST00000517019 125 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 HMGN2P6-201ENST00000551091 273 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 MIR3671-201ENST00000580455 88 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AC090510.2-201ENST00000617465 629 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 AL450226.2-201ENST00000622913 439 ntBASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.67□□□□□ -1.18
CSB-PGBD3P0DP91 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms