Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 HSPA8P1-201ENST00000425843 1833 ntBASIC4.56□□□□□ -1.68
TPM1P09493 CR788268.1-201ENST00000603931 1809 ntBASIC4.56□□□□□ -1.68
TPM1P09493 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TPM1P09493 OR11H4-201ENST00000315409 1082 ntBASIC4.56□□□□□ -1.68
TPM1P09493 MIR423-201ENST00000362201 94 ntBASIC4.56□□□□□ -1.68
TPM1P09493 RN7SKP222-201ENST00000410651 315 ntBASIC4.56□□□□□ -1.68
TPM1P09493 PGBD4P8-201ENST00000412993 562 ntBASIC4.56□□□□□ -1.68
TPM1P09493 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM1P09493 TMSB10P2-201ENST00000416049 131 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AL139095.3-201ENST00000419672 1203 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 RCC2P2-201ENST00000422174 918 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AL359265.2-201ENST00000434367 631 ntBASIC4.56□□□□□ -1.68
TPM1P09493 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 VN1R54P-201ENST00000435210 1049 ntBASIC4.56□□□□□ -1.68
TPM1P09493 ARL2BPP10-201ENST00000446487 531 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 AC016724.1-201ENST00000453215 421 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC092324.1-201ENST00000468671 324 ntBASIC4.56□□□□□ -1.68
TPM1P09493 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 RPL23AP72-201ENST00000492447 435 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC113398.2-201ENST00000507630 558 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM1P09493 RNA5SP73-201ENST00000516744 108 ntBASIC4.56□□□□□ -1.68
TPM1P09493 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 AC091515.1-201ENST00000548110 679 ntBASIC4.56□□□□□ -1.68
TPM1P09493 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 AC084373.1-201ENST00000603311 235 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC010680.3-201ENST00000604215 520 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC133644.2-201ENST00000608142 540 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AL354950.1-201ENST00000614150 568 ntBASIC4.56□□□□□ -1.68
TPM1P09493 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM1P09493 AC008013.2-202ENST00000637965 364 ntBASIC4.56□□□□□ -1.68
TPM1P09493 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TPM1P09493 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM1P09493 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TPM1P09493 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.55□□□□□ -1.68
TPM1P09493 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TPM1P09493 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM1P09493 SPTLC1P2-201ENST00000407089 121 ntBASIC4.55□□□□□ -1.68
TPM1P09493 RN7SKP229-201ENST00000410465 302 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM1P09493 AC096638.2-201ENST00000434965 711 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM1P09493 AC021205.1-201ENST00000468797 348 ntBASIC4.55□□□□□ -1.68
TPM1P09493 S100A11P1-201ENST00000477525 312 ntBASIC4.55□□□□□ -1.68
TPM1P09493 STRADBP1-201ENST00000478954 1281 ntBASIC4.55□□□□□ -1.68
TPM1P09493 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.55□□□□□ -1.68
TPM1P09493 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM1P09493 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM1P09493 RNU6-319P-201ENST00000516025 108 ntBASIC4.55□□□□□ -1.68
TPM1P09493 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.55□□□□□ -1.68
TPM1P09493 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM1P09493 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TPM1P09493 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM1P09493 CBX3P5-201ENST00000552017 521 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM1P09493 AC084783.1-201ENST00000565846 910 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AC079171.1-201ENST00000568788 914 ntBASIC4.55□□□□□ -1.68
TPM1P09493 MIR4270-201ENST00000581799 70 ntBASIC4.55□□□□□ -1.68
TPM1P09493 VN1R84P-201ENST00000593697 235 ntBASIC4.55□□□□□ -1.68
TPM1P09493 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM1P09493 MRPS35P3-201ENST00000603189 709 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AP000255.1-201ENST00000610276 676 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AC016769.4-201ENST00000616893 535 ntBASIC4.55□□□□□ -1.68
TPM1P09493 AC090510.2-201ENST00000617465 629 ntBASIC4.55□□□□□ -1.68
TPM1P09493 MIR6886-201ENST00000619864 61 ntBASIC4.55□□□□□ -1.68
TPM1P09493 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM1P09493 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TPM1P09493 AC244205.2-202ENST00000635781 342 ntBASIC4.55□□□□□ -1.68
TPM1P09493 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TPM1P09493 OR56B2P-202ENST00000641377 2453 ntBASIC4.55□□□□□ -1.68
TPM1P09493 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TPM1P09493 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TPM1P09493 MARK2P15-201ENST00000432204 2186 ntBASIC4.54□□□□□ -1.68
TPM1P09493 CIR1P2-201ENST00000514821 1342 ntBASIC4.54□□□□□ -1.68
TPM1P09493 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM1P09493 AL592148.3-201ENST00000608771 2646 ntBASIC4.54□□□□□ -1.68
TPM1P09493 NCAPGP1-201ENST00000505112 1814 ntBASIC4.54□□□□□ -1.68
TPM1P09493 OR4K15-201ENST00000305051 1216 ntBASIC4.54□□□□□ -1.68
TPM1P09493 SNORA37-201ENST00000384504 129 ntBASIC4.54□□□□□ -1.68
TPM1P09493 RHEBP3-201ENST00000411920 351 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.54□□□□□ -1.68
TPM1P09493 AC115285.1-201ENST00000424879 736 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 BTG3P1-201ENST00000435859 716 ntBASIC4.54□□□□□ -1.68
TPM1P09493 VN1R25P-201ENST00000443385 738 ntBASIC4.54□□□□□ -1.68
TPM1P09493 PHBP16-201ENST00000446318 950 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM1P09493 VN1R40P-201ENST00000455196 941 ntBASIC4.54□□□□□ -1.68
TPM1P09493 RPL7P32-201ENST00000457119 744 ntBASIC4.54□□□□□ -1.68
TPM1P09493 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms