Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.98□□□□□ -1.61
RB1P06400 TPT1P3-201ENST00000492841 512 ntBASIC4.98□□□□□ -1.61
RB1P06400 AC025164.1-201ENST00000496249 478 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 MYL12BP2-201ENST00000503948 512 ntBASIC4.98□□□□□ -1.61
RB1P06400 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.98□□□□□ -1.61
RB1P06400 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.98□□□□□ -1.61
RB1P06400 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.98□□□□□ -1.61
RB1P06400 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.98□□□□□ -1.61
RB1P06400 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 AP003717.3-201ENST00000544832 1180 ntBASIC4.98□□□□□ -1.61
RB1P06400 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
RB1P06400 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.98□□□□□ -1.61
RB1P06400 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.98□□□□□ -1.61
RB1P06400 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.98□□□□□ -1.61
RB1P06400 BNIP3P27-201ENST00000599991 412 ntBASIC4.98□□□□□ -1.61
RB1P06400 AC078880.5-201ENST00000617845 421 ntBASIC4.98□□□□□ -1.61
RB1P06400 BX005214.3-202ENST00000619809 325 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL023881.1-201ENST00000621088 301 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL161637.1-201ENST00000622380 412 ntBASIC4.98□□□□□ -1.61
RB1P06400 AL391262.2-201ENST00000622466 494 ntBASIC4.98□□□□□ -1.61
RB1P06400 FRG1EP-201ENST00000634469 770 ntBASIC4.98□□□□□ -1.61
RB1P06400 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 AC100871.1-201ENST00000507871 1456 ntBASIC4.98□□□□□ -1.61
RB1P06400 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.98□□□□□ -1.61
RB1P06400 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.98□□□□□ -1.61
RB1P06400 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.98□□□□□ -1.61
RB1P06400 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RB1P06400 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.97□□□□□ -1.61
RB1P06400 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 ASNSP1-204ENST00000641977 1664 ntBASIC4.97□□□□□ -1.61
RB1P06400 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.97□□□□□ -1.61
RB1P06400 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
RB1P06400 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 AC017079.1-201ENST00000333650 415 ntBASIC4.97□□□□□ -1.61
RB1P06400 RNU6-468P-201ENST00000384003 109 ntBASIC4.97□□□□□ -1.61
RB1P06400 MIR23B-201ENST00000384832 97 ntBASIC4.97□□□□□ -1.61
RB1P06400 ATP5F1P2-201ENST00000398143 760 ntBASIC4.97□□□□□ -1.61
RB1P06400 HMGB3P18-201ENST00000406327 590 ntBASIC4.97□□□□□ -1.61
RB1P06400 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 OR51B3P-201ENST00000412287 913 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC011933.1-201ENST00000413334 321 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 TRGV6-201ENST00000417928 299 ntBASIC4.97□□□□□ -1.61
RB1P06400 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.97□□□□□ -1.61
RB1P06400 RPS24P8-201ENST00000431490 402 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC011998.1-201ENST00000433403 117 ntBASIC4.97□□□□□ -1.61
RB1P06400 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 MTND6P18-201ENST00000439477 513 ntBASIC4.97□□□□□ -1.61
RB1P06400 TCEA1P3-201ENST00000443005 880 ntBASIC4.97□□□□□ -1.61
RB1P06400 AL359073.1-201ENST00000448036 403 ntBASIC4.97□□□□□ -1.61
RB1P06400 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.97□□□□□ -1.61
RB1P06400 AC116533.1-201ENST00000459748 321 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC090142.1-201ENST00000465776 462 ntBASIC4.97□□□□□ -1.61
RB1P06400 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.97□□□□□ -1.61
RB1P06400 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 SNORA31.9-201ENST00000516429 84 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC010476.1-201ENST00000519111 851 ntBASIC4.97□□□□□ -1.61
RB1P06400 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 PSMB7P1-201ENST00000556349 514 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC093249.4-201ENST00000564755 259 ntBASIC4.97□□□□□ -1.61
RB1P06400 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.97□□□□□ -1.61
RB1P06400 IPO5P1-202ENST00000600039 287 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.97□□□□□ -1.61
RB1P06400 AC005156.1-201ENST00000613371 573 ntBASIC4.97□□□□□ -1.61
RB1P06400 AL049777.1-201ENST00000622740 518 ntBASIC4.97□□□□□ -1.61
RB1P06400 AC015726.3-201ENST00000624501 418 ntBASIC4.97□□□□□ -1.61
RB1P06400 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.97□□□□□ -1.61
RB1P06400 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.97□□□□□ -1.61
RB1P06400 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.97□□□□□ -1.61
RB1P06400 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RB1P06400 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RB1P06400 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.96□□□□□ -1.61
RB1P06400 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.96□□□□□ -1.61
RB1P06400 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RB1P06400 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RB1P06400 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RB1P06400 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RB1P06400 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.96□□□□□ -1.62
RB1P06400 AC021146.4-201ENST00000309229 279 ntBASIC4.96□□□□□ -1.62
RB1P06400 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RB1P06400 RN7SKP97-201ENST00000410966 333 ntBASIC4.96□□□□□ -1.62
RB1P06400 AC099336.2-201ENST00000422457 254 ntBASIC4.96□□□□□ -1.62
RB1P06400 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.96□□□□□ -1.62
RB1P06400 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.96□□□□□ -1.62
RB1P06400 CBX1P4-201ENST00000439415 457 ntBASIC4.96□□□□□ -1.62
RB1P06400 ACTR3P2-201ENST00000439585 1257 ntBASIC4.96□□□□□ -1.62
RB1P06400 ELOCP10-201ENST00000440624 327 ntBASIC4.96□□□□□ -1.62
RB1P06400 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms