Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPL7P28-201ENST00000437739 740 ntBASIC4.36□□□□□ -1.71
APOEP02649 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.36□□□□□ -1.71
APOEP02649 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.36□□□□□ -1.71
APOEP02649 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.36□□□□□ -1.71
APOEP02649 AF213884.1-201ENST00000488102 463 ntBASIC4.36□□□□□ -1.71
APOEP02649 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.36□□□□□ -1.71
APOEP02649 BNIP3P41-201ENST00000503774 571 ntBASIC4.36□□□□□ -1.71
APOEP02649 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.36□□□□□ -1.71
APOEP02649 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.36□□□□□ -1.71
APOEP02649 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 AC138907.10-201ENST00000623708 983 ntBASIC4.36□□□□□ -1.71
APOEP02649 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
APOEP02649 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.36□□□□□ -1.71
APOEP02649 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
APOEP02649 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
APOEP02649 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 AC092162.3-201ENST00000624511 1624 ntBASIC4.35□□□□□ -1.71
APOEP02649 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
APOEP02649 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
APOEP02649 RNA5SP388-201ENST00000362584 119 ntBASIC4.35□□□□□ -1.71
APOEP02649 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 NCSTNP1-201ENST00000406229 144 ntBASIC4.35□□□□□ -1.71
APOEP02649 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
APOEP02649 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.35□□□□□ -1.71
APOEP02649 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 COX6CP15-201ENST00000426313 211 ntBASIC4.35□□□□□ -1.71
APOEP02649 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 BX119904.1-201ENST00000432026 348 ntBASIC4.35□□□□□ -1.71
APOEP02649 AC091390.1-201ENST00000433904 331 ntBASIC4.35□□□□□ -1.71
APOEP02649 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.35□□□□□ -1.71
APOEP02649 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.35□□□□□ -1.71
APOEP02649 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.35□□□□□ -1.71
APOEP02649 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.35□□□□□ -1.71
APOEP02649 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 AL133477.1-201ENST00000457472 514 ntBASIC4.35□□□□□ -1.71
APOEP02649 RPL7P19-201ENST00000469948 618 ntBASIC4.35□□□□□ -1.71
APOEP02649 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.35□□□□□ -1.71
APOEP02649 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.35□□□□□ -1.71
APOEP02649 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.35□□□□□ -1.71
APOEP02649 AL121839.1-201ENST00000556233 1185 ntBASIC4.35□□□□□ -1.71
APOEP02649 AC027176.2-201ENST00000559166 746 ntBASIC4.35□□□□□ -1.71
APOEP02649 AC022655.2-201ENST00000577280 318 ntBASIC4.35□□□□□ -1.71
APOEP02649 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.35□□□□□ -1.71
APOEP02649 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
APOEP02649 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.35□□□□□ -1.71
APOEP02649 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
APOEP02649 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
APOEP02649 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
APOEP02649 SNORD74.4-201ENST00000364129 80 ntBASIC4.34□□□□□ -1.71
APOEP02649 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
APOEP02649 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
APOEP02649 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
APOEP02649 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
APOEP02649 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AP000936.3-201ENST00000438127 255 ntBASIC4.34□□□□□ -1.71
APOEP02649 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
APOEP02649 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AC239809.1-201ENST00000450470 217 ntBASIC4.34□□□□□ -1.71
APOEP02649 RNA5SP246-201ENST00000458909 119 ntBASIC4.34□□□□□ -1.71
APOEP02649 RN7SL585P-201ENST00000470538 280 ntBASIC4.34□□□□□ -1.71
APOEP02649 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
APOEP02649 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.34□□□□□ -1.71
APOEP02649 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.34□□□□□ -1.71
APOEP02649 IGBP1P5-201ENST00000507524 1000 ntBASIC4.34□□□□□ -1.71
APOEP02649 AC017037.1-201ENST00000508460 471 ntBASIC4.34□□□□□ -1.71
APOEP02649 PRELID3BP5-201ENST00000508612 460 ntBASIC4.34□□□□□ -1.71
APOEP02649 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
APOEP02649 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.34□□□□□ -1.71
APOEP02649 UBTFL9-201ENST00000534504 1148 ntBASIC4.34□□□□□ -1.71
APOEP02649 RFPL1S-203ENST00000539579 330 ntBASIC4.34□□□□□ -1.71
APOEP02649 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.34□□□□□ -1.71
APOEP02649 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AC063950.1-201ENST00000552036 308 ntBASIC4.34□□□□□ -1.71
APOEP02649 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.34□□□□□ -1.71
APOEP02649 SULT1C2P2-201ENST00000562517 294 ntBASIC4.34□□□□□ -1.71
APOEP02649 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 AC006116.5-201ENST00000591936 559 ntBASIC4.34□□□□□ -1.71
APOEP02649 AC090948.2-201ENST00000607363 564 ntBASIC4.34□□□□□ -1.71
APOEP02649 AC092653.1-201ENST00000608509 531 ntBASIC4.34□□□□□ -1.71
APOEP02649 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.34□□□□□ -1.71
APOEP02649 MIR7702-201ENST00000621931 59 ntBASIC4.34□□□□□ -1.71
APOEP02649 AC008785.1-201ENST00000624475 456 ntBASIC4.34□□□□□ -1.71
APOEP02649 AC090506.2-201ENST00000624521 419 ntBASIC4.34□□□□□ -1.71
APOEP02649 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.34□□□□□ -1.71
APOEP02649 CUL4AP1-201ENST00000514750 1863 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms