Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC009852.2-201ENST00000567898 485 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX2-2O95096 MIR5708-201ENST00000579723 85 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 VN1R83P-201ENST00000595685 445 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AC093765.1-201ENST00000603758 881 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AC098935.2-201ENST00000604222 466 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AL392112.1-201ENST00000605115 829 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 SDR42E1P1-201ENST00000611327 477 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 AL022401.1-201ENST00000619498 108 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 CASC19-206ENST00000641028 1430 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 AL031119.1-201ENST00000404707 1879 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-2O95096 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NKX2-2O95096 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-2O95096 AC090971.4-201ENST00000560291 1800 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 THAP12P5-201ENST00000405864 2275 ntBASIC4.51□□□□□ -1.69
NKX2-2O95096 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC008549.2-201ENST00000333482 706 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 RN7SKP104-201ENST00000362605 328 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 SNORA40.2-201ENST00000390847 128 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 OR4K6P-201ENST00000416478 897 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AL356320.2-201ENST00000417263 507 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC019050.1-201ENST00000418508 492 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 RGS17P1-201ENST00000423358 553 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 HMGB3P5-201ENST00000428894 612 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 RBMY2QP-201ENST00000429799 1147 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AL451139.1-201ENST00000434718 346 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 RPL12P46-201ENST00000436610 195 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC004865.1-201ENST00000442276 1003 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 RPS27AP15-201ENST00000447672 466 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 SLC25A18P1-201ENST00000449385 454 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 RPL30P11-201ENST00000495304 339 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 GAPDHP56-201ENST00000506031 988 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC113347.3-201ENST00000509113 148 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 OR4U1P-201ENST00000554958 912 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AL049839.1-201ENST00000556151 657 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 MTND3P13-201ENST00000574391 343 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 MIR4716-201ENST00000579628 84 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.5□□□□□ -1.69
NKX2-2O95096 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC020910.3-201ENST00000603701 874 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AL445222.1-201ENST00000607259 628 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC243756.2-201ENST00000618406 463 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC012414.7-202ENST00000622705 1090 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC018445.2-201ENST00000622987 260 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AL157770.1-201ENST00000623049 439 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AP000770.2-201ENST00000623694 100 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
NKX2-2O95096 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC090897.3-201ENST00000636973 1157 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 ZNF663P-202ENST00000641770 1131 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
NKX2-2O95096 INTS6P1-201ENST00000504674 2530 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 TCP11X1-202ENST00000622971 1372 ntBASIC4.5□□□□□ -1.69
NKX2-2O95096 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms