Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 RPS29P33-201ENST00000456717 146 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.17□□□□□ -1.74
SHOX2O60902 AC022034.3-201ENST00000471393 478 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 PPIAP15-201ENST00000479662 484 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 AC004069.2-201ENST00000505438 1114 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 USP9YP5-201ENST00000511770 630 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.17□□□□□ -1.74
SHOX2O60902 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.17□□□□□ -1.74
SHOX2O60902 OR7E10P-201ENST00000526420 991 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.17□□□□□ -1.74
SHOX2O60902 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.17□□□□□ -1.74
SHOX2O60902 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 AC099489.2-201ENST00000574976 260 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.17□□□□□ -1.74
SHOX2O60902 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 AC025031.4-201ENST00000621248 3271 ntBASIC4.17□□□□□ -1.74
SHOX2O60902 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.17□□□□□ -1.74
SHOX2O60902 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
SHOX2O60902 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHOX2O60902 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHOX2O60902 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SHOX2O60902 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.16□□□□□ -1.74
SHOX2O60902 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.16□□□□□ -1.74
SHOX2O60902 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHOX2O60902 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHOX2O60902 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHOX2O60902 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHOX2O60902 RNA5SP105-201ENST00000391123 113 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 RNA5SP113-201ENST00000410486 84 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHOX2O60902 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 RPS6P12-201ENST00000432491 726 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC016831.4-201ENST00000438302 307 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 SERPINA7P1-201ENST00000443077 631 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 ARL2BPP10-201ENST00000446487 531 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 RPL7P16-201ENST00000479738 738 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 RPL21P129-201ENST00000491732 478 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 RPS27AP16-201ENST00000492222 470 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.16□□□□□ -1.74
SHOX2O60902 NIPA2P2-201ENST00000496376 1083 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.16□□□□□ -1.74
SHOX2O60902 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 MTND1P6-201ENST00000523621 946 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 PCNPP1-201ENST00000552501 511 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC063949.1-201ENST00000552900 865 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 AL121576.1-201ENST00000556055 276 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.16□□□□□ -1.74
SHOX2O60902 AGGF1P8-201ENST00000562979 1000 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 MIR3667-201ENST00000581025 74 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC069366.1-201ENST00000583159 838 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.16□□□□□ -1.74
SHOX2O60902 AC234771.5-201ENST00000600161 514 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.16□□□□□ -1.74
SHOX2O60902 AL133338.2-201ENST00000604292 736 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC006946.3-201ENST00000609791 756 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AL445528.2-201ENST00000620582 470 ntBASIC4.16□□□□□ -1.74
SHOX2O60902 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.16□□□□□ -1.74
SHOX2O60902 MAPK10-372ENST00000641954 3413 ntBASIC4.15□□□□□ -1.74
SHOX2O60902 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.15□□□□□ -1.74
SHOX2O60902 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SHOX2O60902 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SHOX2O60902 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHOX2O60902 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHOX2O60902 Y_RNA.126-201ENST00000363382 111 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 MIR23B-201ENST00000384832 97 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.15□□□□□ -1.75
SHOX2O60902 CHIAP3-201ENST00000423668 1133 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.15□□□□□ -1.75
SHOX2O60902 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.15□□□□□ -1.75
SHOX2O60902 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.15□□□□□ -1.75
SHOX2O60902 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.15□□□□□ -1.75
SHOX2O60902 AC103987.1-201ENST00000473394 348 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC020898.1-201ENST00000474167 787 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC092045.1-201ENST00000495716 1231 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 KATNBL1P4-201ENST00000503545 918 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.15□□□□□ -1.75
SHOX2O60902 PGBD4P4-201ENST00000509673 613 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC026726.1-201ENST00000512859 601 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms