Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 BTF3P10-201ENST00000433415 495 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 KCTD9P3-201ENST00000434597 1169 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 RPL7P28-201ENST00000437739 740 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 MTND4LP12-201ENST00000448237 295 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 FCF1P7-201ENST00000451185 558 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 RNA5SP246-201ENST00000458909 119 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 RPL7P1-201ENST00000468161 747 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 RPL7P9-201ENST00000468715 747 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 UQCRHP4-201ENST00000471686 272 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC041039.1-201ENST00000485656 536 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC025674.1-201ENST00000507074 324 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC099522.1-202ENST00000514718 367 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.39□□□□□ -1.87
SDCBPO00560 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 AC114878.2-201ENST00000604863 1251 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC078899.5-201ENST00000612475 178 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC010809.3-201ENST00000621310 641 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 BMS1P21-201ENST00000634565 365 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SDCBPO00560 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.39□□□□□ -1.87
SDCBPO00560 NCAPGP1-201ENST00000505112 1814 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 AC053481.2-202ENST00000582394 1500 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 AC005261.4-201ENST00000600047 1385 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SDCBPO00560 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SDCBPO00560 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 RNU6-1263P-201ENST00000384601 106 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 AL161909.1-201ENST00000397390 712 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 AL590806.1-201ENST00000415818 853 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.38□□□□□ -1.87
SDCBPO00560 ATP5HP2-201ENST00000433885 485 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 RPL38P1-201ENST00000460914 211 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 BTF3L4P4-201ENST00000506381 449 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SDCBPO00560 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.38□□□□□ -1.87
SDCBPO00560 RNA5SP228-201ENST00000516232 133 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 RNU6-943P-201ENST00000516960 98 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SDCBPO00560 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.38□□□□□ -1.87
SDCBPO00560 AC022968.1-201ENST00000567372 442 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 AC008745.1-201ENST00000604064 271 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 ARF4P1-201ENST00000605447 541 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 MIR3653-201ENST00000625572 110 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
SDCBPO00560 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SDCBPO00560 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SDCBPO00560 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.38□□□□□ -1.87
SDCBPO00560 AL627171.1-201ENST00000618845 1308 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SDCBPO00560 LARP1BP1-201ENST00000506036 1359 ntBASIC3.38□□□□□ -1.87
SDCBPO00560 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.37□□□□□ -1.87
SDCBPO00560 UBE3AP2-201ENST00000429033 2259 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SDCBPO00560 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.37□□□□□ -1.87
SDCBPO00560 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SDCBPO00560 SNORA60-201ENST00000362396 134 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.37□□□□□ -1.87
SDCBPO00560 HSPD1P16-201ENST00000402302 394 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 MIR1251-201ENST00000408552 70 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC108032.1-201ENST00000416706 207 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.37□□□□□ -1.87
SDCBPO00560 AL592293.2-201ENST00000422292 996 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.37□□□□□ -1.87
SDCBPO00560 AC073143.1-201ENST00000436316 395 ntBASIC3.37□□□□□ -1.87
SDCBPO00560 AL357520.1-201ENST00000441557 453 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms